Gene Tbis_0652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_0652 
Symbol 
ID9167136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp715439 
End bp717799 
Gene Length2361 bp 
Protein Length786 aa 
Translation table11 
GC content71% 
IMG OID 
ProductATP-dependent DNA helicase PcrA 
Protein accessionYP_003651270 
Protein GI296268638 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.782155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.523807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTTT CGTCCGGCGC GCACCGCCAC CGGGAGCGGG AAGCCCGCGG CGCGTGCGGC 
GGTCATCGGT CTTCGGTTGT CATTGGACCG CCTTACTCTA AGGACGTGTC CACCCGAGCA
GTCACCCATC CTCTGCTGGA CGGCCTCAAC CCGCAGCAAC GGGAGGCCGT CCTGCACCAG
GGAAGCCCGC TCCTGATCGT CGCAGGCGCG GGCTCGGGAA AGACGCGGGT GCTCACGCAT
CGCATCGCCT ATCTGCTCGC CGAGCGGCGG GTCCACCCCG CGGAGATCCT CGCCATCACG
TTCACCAACA AGGCGGCGCG GGAGATGAGG GACCGGGTCG ACCGGCTGGT CGGCCCGCGC
TCGCAGCTCA TGTGGGTGAT GACCTTCCAC AGCGCCTGCG TGCGCATCCT CCGCAGGGAG
GCGAAGCGGC TCGGCTACCC GACCAACTTC ACGATCTACG ACCAGGCCGA TGCGCAGCGG
CTCATGGCGA TGGTCTGCCG TGAGCTCGAC CTCGACCCCA AGCGGTACCC GCCGCGCTCG
TTCGCCGCGC AGGTGAGCGC GTTCAAGAAC GAGCTGATCG ACCACGAGAC CGCGGCGTCG
CGCGCCCAGA CCCACCTGGA GCGCACCCTC GCCGAGGCCT ACCGCATCTA CCAGACGCGG
CTGACCGAGG CGGGGGCGAT GGACTTCGAC GACCTCATCA TGCAGACGGT CGCCCTGTTC
CAGCTCTTCC CCGAGGTGGC GGAGCACTGG CGGCGGCGGT TCCGGCATGT GATGGTCGAC
GAGTACCAGG ACACCAACCA CGCCCAGTAC GTGCTCGTCC GCGAGCTGGT CGGCCGCCCC
GAGGTCCGCA CCGTGGACGG CGACGTGGTG CGGGAGGGCG TCGCCGACCC GGCCGAGCTC
GTCGTCGTGG GCGACGCCGA CCAGTCGATC TACGCGTTCC GCGGCGCGAC CATCCGCAAC
ATCCTCGAGT TCGAGCGCGA CTTCCCCGAC GCCCGGACCA TCCTCCTGGA GCAGAACTAC
CGCTCCACCC AGACGATCCT CGACGCCGCC AACGCGGTGA TCTCCCGCAA CCAGGGCCGC
AAGCCGAAGA ACCTCTGGTC GGACCAGGGC CCCGGGCCGA AGATCGTCGG CTACGTGGCC
GACAACGAGC ACGACGAGGC GCTGTTCGTC GCGCAGGAGG TGGACCGGCT CGCCGACGAG
GAGGGGATCA AGCCCGGCGA CGTCGCCGTG TTCTACCGCA CGAACGCCGC CTCCCGGGTG
TTCGAGGAGG TCTTCAGCCG TACGGGCCTG CCGTACCGGA TCGTGGGCGG GGTGCGGTTC
TTCGACCGCA AGGAGGTCAA GGACCTGCTC GCCTACCTGC GGATCCTGGT CAACCCGAAC
GACACCGTGT CGCTGCGCCG CATCCTCAAC GTGCCCAAGC GCGGCATCGG CGAGCGGGCC
GAGGCGATGA TCGAGGCGTT CGCCGCCCGG GAGCGCATCC CGTTCTGGGA GGGCCTGAAG
CGGGCCCAGG AGGCCCCCGG CCTCGCCACC CGCTCGCTCA ACGCGATCCG GGACTTCGTC
GCGCTCATCG AGGACCTGCG GGCCCGGGAG CTCCCCCTGC GCGACCTCGT CGAGGAGGTG
GCGAACGCCA CCGGCTACCG GGTGGAGCTG GAGGAGTCGG ACGACCCGCA GGACGCGAAC
CGGCTCGACA ACATCAAGGA GCTGGTCTCG ATGGCCGCCG AGTACGAGGC GGCCAACCCG
GACGGCGGCC TGGTCGGCTT CCTCGAGCAG GTCTCCCTGG TCTCCGACGC CGACGAGATC
CCGGACGGGG AGGACCACGG CGGGGTGGTC ACGCTGATGA CGCTGCACAC CGCCAAGGGC
CTGGAGTTCC CCGTGGTCTT CCTCACCGGC ATGGAGGACG GCGTCTTCCC GCACCAGCGC
TCCATGACCG ACCCCAAGGA GCTGGAGGAG GAGCGCCGGC TCGCCTACGT GGGCATCACC
CGGGCCAAGC AGCGGCTCTA TTTCTCCCGC GCGGTGGTCC GCTCCGCCTG GGGCGCCCCC
TCGTTCAACC CGGCGTCGCG TTTCCTCGAC GAGGTGCCGG CCGAGCTGAT CGAGTGGCGG
ACCGACCCGG GCAAGACCCC GTGGACCGCG GCGACCGAGC GGCGGGAGCC CGGGCGGTCC
CGTACGGCCG GGCCGGCCCG GCCGGGCGCC CGCCCGATCC CCGCCCTGGC GCCGGGCGAC
CGGGTCGCGC ACGAGAAGTT CGGCGTCGGC ACGGTGATCA GCGTGGACGG GGTGGCCGAG
AAGGCCCGGG CCACGGTCGA CTTCGGCGGC GCAGGCGAGA AGACGCTGCT CCTCGCCTAC
GCGCCGATCG AGAAGCTCTA G
 
Protein sequence
MPLSSGAHRH REREARGACG GHRSSVVIGP PYSKDVSTRA VTHPLLDGLN PQQREAVLHQ 
GSPLLIVAGA GSGKTRVLTH RIAYLLAERR VHPAEILAIT FTNKAAREMR DRVDRLVGPR
SQLMWVMTFH SACVRILRRE AKRLGYPTNF TIYDQADAQR LMAMVCRELD LDPKRYPPRS
FAAQVSAFKN ELIDHETAAS RAQTHLERTL AEAYRIYQTR LTEAGAMDFD DLIMQTVALF
QLFPEVAEHW RRRFRHVMVD EYQDTNHAQY VLVRELVGRP EVRTVDGDVV REGVADPAEL
VVVGDADQSI YAFRGATIRN ILEFERDFPD ARTILLEQNY RSTQTILDAA NAVISRNQGR
KPKNLWSDQG PGPKIVGYVA DNEHDEALFV AQEVDRLADE EGIKPGDVAV FYRTNAASRV
FEEVFSRTGL PYRIVGGVRF FDRKEVKDLL AYLRILVNPN DTVSLRRILN VPKRGIGERA
EAMIEAFAAR ERIPFWEGLK RAQEAPGLAT RSLNAIRDFV ALIEDLRARE LPLRDLVEEV
ANATGYRVEL EESDDPQDAN RLDNIKELVS MAAEYEAANP DGGLVGFLEQ VSLVSDADEI
PDGEDHGGVV TLMTLHTAKG LEFPVVFLTG MEDGVFPHQR SMTDPKELEE ERRLAYVGIT
RAKQRLYFSR AVVRSAWGAP SFNPASRFLD EVPAELIEWR TDPGKTPWTA ATERREPGRS
RTAGPARPGA RPIPALAPGD RVAHEKFGVG TVISVDGVAE KARATVDFGG AGEKTLLLAY
APIEKL