| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2816 |
|---|
| Symbol | |
|---|
| ID | 3672967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 2898345 |
|---|
| End bp | 2900111 |
|---|
| Gene Length | 1767 bp |
|---|
| Protein Length | 588 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637711524 |
|---|
| Product | ABC transporter ATPase |
|---|
| Protein accession | YP_316574 |
|---|
| Protein GI | 74318834 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.372787 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGACCT GGCGCAGCAT CGTCGACGAG CTTCGCCGCC ACCGCGCGGC GCTGCTGCAG
GCGAATCTCG CGGCCGTGCT GGCGGTCGTC GCGGCCGTTC CGGTGCCGTT GTTGCTGCCG
CTCATGGTCG ACGAGGTGCT GCTGCACCAT CCGGGCAGGA TCGTCGACGC GATCGGCGCC
TGGTTTCCGA CGTCCTGGCA TGGGCCGGTG CTGTTCATCG GCGTCGCGCT GCTGGCGACG
GTCGCGCTGC GGCTCGCCGC GATCGTGCTC AACGTGTGGC AGGGGCGGAC CTTCTCGCTG
CTCGCGAAGG AAGTTGTCTA CCGCATCCGT GAACGCATGC TCGCGCGGCT CTCGCGCACT
GCGCTGTCCG AGTTCGAGAC CGTCGGCGCG GGGCGCGTCA CCTCGCATTT CGTCACCGAC
CTCGGCGCGA TCGACACTTT CCTCGGGGCT TCGATTTCGG GGCTGCTCGT CTCGGTACTG
ACGCTGGTCG GCGTGGCTGG CGTGCTGTTC TGGATGCACT GGCAGCTCGC GCTCTTCATC
CTGCTGCTCA ACCCGGTCGT GATCCTGTTT TCGACCCGAC TCGGCAAACG GGTCAAGGAC
TTGAAGAAGT TCGAGAACCG CGCCTTCGAG GCGTTTCAGG ACGCGCTCGC CGAAACGCTC
GACGCGCTGA CGCAGATCCG CGCGATGAAC CGCGAAAAGC ACTACCTCGC GCGCGTGACC
GAGAAGGCCG CCGATATCCG CCGCCACGCC GCGGCCTTCG CCTGGAAGTC CGACGCGATG
AGCCGCTTTT CCTTCTTCAT CTTTCTCGCC GGCTTCGACG CCTTTCGGGC CGGCGCGATG
CTGATGGTCG TCTACTCCGA CCTCTCGATC GGCGAGATGC TCGCGGTGTT CGGCTACCTC
TGGTTCATGA TGACGCCGGT GCAGGAGCTC GTGAACATGC AGTATTCGTG GTTCGCCGCG
AACGCCGCGC TGACGCGGAT CAACGCGCTG CTCGGCCTGC ACAGCGAGGC GCGGTACCCG
GCGCGCGAGA ACCCGTTCGC CGGCGTGCCG ACCGTCGGCA TCGCGCTCGA GCACGTGAGT
TTCGCCTACG GCGAAGGCGA GGACGTGCTC GAGGACGTCA GTCTGAGCGT CGCGCCCGGG
GAAAAGGTCG CGCTGGTCGG CGCCTCCGGC GGCGGCAAGT CGACGCTCGT GCAGGCCCTG
CTTGGGCTCT ATCCGCTCCG CGTAGGGCAG ATCTGCTACG GCGGCGTGCC GGTGAGCGCG
ATCGGCTGGG AAACCGTGCG CGAATACGTC GGTGTCGTGC TGCAGCATCC GGTGCTCTTC
AACGACACGG TGCGCGCCAA CCTCACGCTC GGCCGCAGCG CCGACGACGC GACGCTGTGG
CGCGCGCTCG CGATCGCCCA GCTCGACGCG ACCGTCGCGG AGCTGCCGCA GGGTCTGGAC
ACCATGGTCG GGCGCCAAGG CGTGCGTCTA TCGGGGGGCC AGCGGCAGCG CCTCGCGATC
GCGCGCATGG TCGTCGCCGA GCCGCGTATC GTGATCCTCG ACGAGGCGAC GTCGGCGCTC
GATACCGAGA CCGAGCGCCG CCTGCACCAG GCGCTCGGCG AATTCCTCGC TGGCCGCACG
ACGCTGATCA TCGCCCACCG CCTGTCGGCC GTGCGCCAGG CCGACCGGAT TCTGGTGTTC
GAAAACGGCC GCGTGGTCGA GGAGGGCGAT CACGCCGCGC TGATCGACCG CGGCGGCCTC
TATCACAAGC TTTATCACCA CGCCTAG
|
|---|
| Protein sequence | MLTWRSIVDE LRRHRAALLQ ANLAAVLAVV AAVPVPLLLP LMVDEVLLHH PGRIVDAIGA
WFPTSWHGPV LFIGVALLAT VALRLAAIVL NVWQGRTFSL LAKEVVYRIR ERMLARLSRT
ALSEFETVGA GRVTSHFVTD LGAIDTFLGA SISGLLVSVL TLVGVAGVLF WMHWQLALFI
LLLNPVVILF STRLGKRVKD LKKFENRAFE AFQDALAETL DALTQIRAMN REKHYLARVT
EKAADIRRHA AAFAWKSDAM SRFSFFIFLA GFDAFRAGAM LMVVYSDLSI GEMLAVFGYL
WFMMTPVQEL VNMQYSWFAA NAALTRINAL LGLHSEARYP ARENPFAGVP TVGIALEHVS
FAYGEGEDVL EDVSLSVAPG EKVALVGASG GGKSTLVQAL LGLYPLRVGQ ICYGGVPVSA
IGWETVREYV GVVLQHPVLF NDTVRANLTL GRSADDATLW RALAIAQLDA TVAELPQGLD
TMVGRQGVRL SGGQRQRLAI ARMVVAEPRI VILDEATSAL DTETERRLHQ ALGEFLAGRT
TLIIAHRLSA VRQADRILVF ENGRVVEEGD HAALIDRGGL YHKLYHHA
|
|---|
| |