| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2814 |
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| Symbol | |
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| ID | 3672965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 2895176 |
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| End bp | 2896141 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637711522 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_316572 |
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| Protein GI | 74318832 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAATCT ACCAGCGCAT TTTCGAATAC GCGCCCGACG CGATGCTCGT GCTCGGCCGC
GACGGCCTCC TGCGCCTGGT CAACGCGCAC GCCGAGACGC TGTTCGGCTA CGACCGCAGC
GAACTGCTCG GCCAGACCGT CGAGCTGCTC GTGCCCGCGC GTTTCACGGC GCAGCACGCG
GCGCACCGCG CGCGCTTCAT GGAGGAGGCG CAGAGCCGGC AGATGGGGCG CCAGCAGGAT
CTTTACGCAC TGCGCAAGGA CGGCAGCGAG TTCCCGGTCG ACATCATGCT GAGCCCGATG
ATCATGGGCG GCGAGCACCT GACGCTATGC GTGGTGCGCG ACATCACCGA ACGCAAGGCC
GCGCAGGATG CGCTCGAGCA TCAGACCAAC GAGTTGTTGC GCCTGCATGC CGAACTCGAA
CTCCTCGCCA ACCACGACGG GCTCACCGGC CTGTACAACT GGCGGGCGTT CTATGAACAC
GCCGGACAGT TGCTGACGAC CGCGCACCGC CGCCACGAGA AAGCGTCGCT CCTGATCCTC
GACCTCGATC ATTTCAAGCA GATCAACGAC CGCTTCGGCC ACGCCGAAGG CGACCGCGTG
CTGCAAGCCG CCGCCGCCGC GTTGAAGGCG AGCGCGCGGC AGAACGACAT CGTCGCCCGG
CACGGCGGCG AAGAGTTCGT GATCGCCGGG TTCGGCCTCA GCGAAGCGGA AAGCCTCGTT
GCCGCCGAGC GCCTGCGCGC GGCGGTCGCG AGCATCGAAA ATCTCGCGTG CCGCGTGACG
ACGAGCGTCG GCGTCGCCAC CTTCGTGCCC GACCCGTCGA GCAGGCACGA ACCGCCGACG
CTACTGGCAG ATCTGCTCGA TCGGGCCGAT CAGGCGCTCT ACCACGCCAA GCGGAGCGGC
AGGAACCGGA TCTGCCACTT CGACCAGCTC GGGGAAGACA TCGCGCCGGC GAGCGATTCA
CCGTAG
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| Protein sequence | MEIYQRIFEY APDAMLVLGR DGLLRLVNAH AETLFGYDRS ELLGQTVELL VPARFTAQHA
AHRARFMEEA QSRQMGRQQD LYALRKDGSE FPVDIMLSPM IMGGEHLTLC VVRDITERKA
AQDALEHQTN ELLRLHAELE LLANHDGLTG LYNWRAFYEH AGQLLTTAHR RHEKASLLIL
DLDHFKQIND RFGHAEGDRV LQAAAAALKA SARQNDIVAR HGGEEFVIAG FGLSEAESLV
AAERLRAAVA SIENLACRVT TSVGVATFVP DPSSRHEPPT LLADLLDRAD QALYHAKRSG
RNRICHFDQL GEDIAPASDS P
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