Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2785 |
Symbol | |
ID | 3672851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 2866289 |
End bp | 2867053 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637711493 |
Product | short chain dehydrogenase |
Protein accession | YP_316543 |
Protein GI | 74318803 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.73728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.939169 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCCGCCG CGCCGCTCAA GGTTTTCATC ACCGGCGCGA GCTCCGGTCT CGGCGCGGCG CTCGCCCGCC ATTACGGCGC ACGCGGTGCG CAACTCGGCC TCGTCGGCCG CCGCATCGAG GGCTTGCACG CCACGGCTGC GGGCCTCGAC GCCCGCGTCT ACTGCGCCGA CGTCCGCGAC GCCGCCGCGC TGCAGAAGGC TGCCGCCGCG TTTCTCGAGG CGGTCGGCGC CCCGGACGTC GTCATCGCCG CGGCCGGCAT CAGCGTCGGA ACCCTGACCG AGACCGCCGC CGACGCTCCG GTGTTTCGCG CCGTCATGGA CGCCAACGTG CTCGGCCTCG TGCACACCTT CCAGCCCTTC ATCGCATCGA TGCAAAAAGG CGGCGTGCTG TGTGGCATTT CGAGCGTCGC CGGCGTGCGC GGGCTCCCCG GGGGCGGCGC GTATTCGGCT TCGAAGGCCG CGGCGACGGT CTATCTCGAG GCGCTGCGCC TCGAACTGAA GGCACGCGGC ATCGCCGTCG TCACGGTCGC GCCGGGCTAT ATCGACACGC CGATGACACG CGTGAACCCC TACGCGATGC CGTTCAGGAT GAGCGCCGAA ACCGCGGGCG CACGCGTCGC CCGATGCATC GCCCGGCGCC GCGCCTATGC GGTCATTCCG TGGCAGATGG CGTGGGTCGC TGCGGCGCTC AAATGGCTGC CGAACCCGCT CTATGATTTA TTATTCGAGA AAGCCCCCCG CAAGCCGCGT GGCTTGCCGA CGTGA
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Protein sequence | MPAAPLKVFI TGASSGLGAA LARHYGARGA QLGLVGRRIE GLHATAAGLD ARVYCADVRD AAALQKAAAA FLEAVGAPDV VIAAAGISVG TLTETAADAP VFRAVMDANV LGLVHTFQPF IASMQKGGVL CGISSVAGVR GLPGGGAYSA SKAAATVYLE ALRLELKARG IAVVTVAPGY IDTPMTRVNP YAMPFRMSAE TAGARVARCI ARRRAYAVIP WQMAWVAAAL KWLPNPLYDL LFEKAPRKPR GLPT
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