| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2768 |
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| Symbol | gltD |
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| ID | 3672834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 2849783 |
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| End bp | 2851228 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637711476 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_316526 |
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| Protein GI | 74318786 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.407102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.66325 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGACG TATTCCAGTT CCTGAAGCAG TCGCGCCGCG ACGGCGCGAA GACGCCTGCC
GACGTGCGCA AGCATGAATT CCGCGAGATC TACGCGCTGA TGGACCCGGC GCACGCGCAG
GAGCAGGCCG ACCGCTGCCT CGGCTGCGGC AACCCCTACT GCGAGTGGAA GTGCCCGGTG
CACAACTACA TCCCGAACTG GCTCAAGCTC GTGAACGAAG GCCGCCTGTT CGAGGCGGCC
GAACTCTCGC ACCAGACCAA TTCGCTGCCC GAGGTGTGCG GCCGCGTGTG TCCGCAGGAC
CGGCTCTGCG AAGGCGCCTG CACGCTCAAC ACCGACGGCT TCGGTGAAGC GGTCGGCGGC
GGCCCGAACA CGGGCGGCTT CGGCGCGGTC ACGATCGGCC AGATCGAGCG CTACATTTCC
GAGGAGGCAT TCAAGGCCGG CTGGCGGCCC GACCTCTCGA ACGTCGTGCC GAGCGGCAGG
AGGGTCGCCG TGATCGGCGC AGGCCCGGCC GGCCTCGCCT GCGCCGACGT GCTTGCGCGC
AACGGCGTGC AAGCGGTGGT CTACGACCGC TACGACGCGA TCGGCGGCCT GCTGACCTTC
GGCATCCCCG AGTTCAAGAT GGAAAAGACC GTCATGACCC GCCGCCGCGA GGTATTCGAG
GGCATGGGCA TCGAATTCCG TCTCAACACC GAGGTCGGCC GCGACGTCTC GATGCAGACC
TTGCTCGACG AATACGACGC CGTATTCATG GGCATGGGCA CCTACACCTA CATGAAGGGC
GGCTTCCCGG GCGAGGACCT GCCGGGCGTG CTCGAAGCGC TGCCCTTCCT GATTTCCAAC
GTCCGCCAAT GCCTCGAACT CGCCGGTCCG GACGAGGCCT TCCACGACAT GAAGGGCAAG
CGCGTCGTCG TCCTCGGCGG CGGCGACACG GCGATGGACT GCAACCGCAC GAGCATCCGC
CAGGGCGCGG CGTCCGTCGT CTGCGCCTAC CGGCGCGACG AGAAGAACAT GCCCGGCTCC
AAGCGCGAAG TCGCCAACGC CAAGGAAGAA GGCGTGCAAT TCCTGTGGAA CCGCCAGCCG
GTCGAGATCG TAGGCAACGG CCGCGTCGAG GGCGTCAAGC TCGTCACGAC CGAACTCGGC
CCGCCCGACG CGCGCGGCCG CCGCACGCCG GTCGTCATTC CGGGTTCTGA GGAAATCATC
GCAGCCGACC ACGTCATAGT CGCCTTCGGC TTCCGCCCGA ACCCGCAGCC CTGGTTCGCC
GAGCACGCGA TCGCGACCGA CCCCGCCGGG CGTGTCATCG CGAGCGGCCA GGCGCACCCC
TACCAGACCG CCAACCCCAA GGTCTTCGCC GGCGGCGACA TGGTCCGCGG TTCCGACCTC
GTCGTGACCG CGGTGTGGGA AGGCCGCGAG GCCGCCAAGG GTATCCTCGC CTACCTCGAG
ATCTAG
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| Protein sequence | MGDVFQFLKQ SRRDGAKTPA DVRKHEFREI YALMDPAHAQ EQADRCLGCG NPYCEWKCPV
HNYIPNWLKL VNEGRLFEAA ELSHQTNSLP EVCGRVCPQD RLCEGACTLN TDGFGEAVGG
GPNTGGFGAV TIGQIERYIS EEAFKAGWRP DLSNVVPSGR RVAVIGAGPA GLACADVLAR
NGVQAVVYDR YDAIGGLLTF GIPEFKMEKT VMTRRREVFE GMGIEFRLNT EVGRDVSMQT
LLDEYDAVFM GMGTYTYMKG GFPGEDLPGV LEALPFLISN VRQCLELAGP DEAFHDMKGK
RVVVLGGGDT AMDCNRTSIR QGAASVVCAY RRDEKNMPGS KREVANAKEE GVQFLWNRQP
VEIVGNGRVE GVKLVTTELG PPDARGRRTP VVIPGSEEII AADHVIVAFG FRPNPQPWFA
EHAIATDPAG RVIASGQAHP YQTANPKVFA GGDMVRGSDL VVTAVWEGRE AAKGILAYLE
I
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