| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2733 |
|---|
| Symbol | |
|---|
| ID | 3672799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 2814863 |
|---|
| End bp | 2816125 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637711441 |
|---|
| Product | MFS permease |
|---|
| Protein accession | YP_316491 |
|---|
| Protein GI | 74318751 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCGA CGCGCCGCTG GAACGCATGC TGGCGGGCGC GTAAGCTCCG CCCGTCCACC
TCGAACCCCC GTCGCCCCAT GCAGACCCCC TCCCGCGCCA ACCTCCTGAT CCTCGCGTCG
AGCCAGGCCT TGATGCTGTC GGCCATCGTT CTGTCGATGA CGCTCGCGGC GGTGCTCGGT
GCCATGCTCG CGCCCGACAG GGGGCTCGCG ACGCTGCCGG TCGCAGCGAT GGTCGTCGGC
ACCGCGTTCG CGTCGATGCC GGCGTCGATG CTCATGCGCC GCATGGGCCG CCGGCCCGGG
TTCCTGATCG GCGCGCTGCT CGGCATTGGC GGCAGCCTGC TCTGCGCGCT TGGGCTTTAC
GAGAGCGACT TCGCCGTGTT CGTCGGCGGC AATTTCCTGC TCGGCAGCTA CCAGGGCTTC
GCCAACTACT ACCGCTTCGC CGCCGTCGAG GCCGCGGGGC CCGCGCGGGC CGGCAAGGCG
ATTTCCATGG TCGTCGCGGG CGGCGTCGTC GCGGCCTTCC TCGGCCCCCA GCTCGGTGTG
TGGGGGCGCG ACTGGGTCGC GGGGCAGATC TTCGTCGGTT CGTATCTGGC GCAGGCAGGC
TTAAGTCTCG TCGCCTTCGC GCTGCTGCTG CTGCTGCGCC TGCCCCCGGA GGCGCAGCAG
GACACCGGCC ACGCGCGCCC GCTCGCCGAC ATCCTGCGCC AGCCCGTGCT CGGCGTCGCG
ATCTTCGGCG CGGCGATCGG CTACGCGGTC ATGATCATGG TGATGACCGC GACGCCGCTC
GCGATCCTGG GCTGCGGCCT GCCCGAGTCG GACGTCGCGC CGGTGATCCA GTGGCACGTC
GTCGGCATGT TCGCGCCGTC CTTCTTCACC GGCGCGCTGA TCGCGCGCTT CGGCGCACCG
CGCGTCATGC AGGCGGGCTT CGTCCTGCTG CTCGGCCACG TCGCCCTGGT CCTCTCGGGG
GTCGAGTTCC TGCACTTCCT GTCGGGCTTG GTCCTGCTCG GCGTCGGCTG GAATTTCGCG
TTCATCGGCG GCACCACGCT GCTGACCCAG AGCTATCGCC CGGCCGAGCG GCTCAAGGTG
CAGGCGGTCA ACGAGTTCGC GGTCTTCGGC TTCGCCGCGC TGGCGACACT CTCGGCGGGC
TGGCTCTACG ACCGCTTCGG CTGGGCCGTG CTCAACGTCG CGGTGATTCC GCTTCTGCTC
GCGGCCTTGC TCGCGGCGAT CGCGATCGAG CGGCAGTTCC GGCGCGCGGC CCTCGCCACC
TGA
|
|---|
| Protein sequence | MRSTRRWNAC WRARKLRPST SNPRRPMQTP SRANLLILAS SQALMLSAIV LSMTLAAVLG
AMLAPDRGLA TLPVAAMVVG TAFASMPASM LMRRMGRRPG FLIGALLGIG GSLLCALGLY
ESDFAVFVGG NFLLGSYQGF ANYYRFAAVE AAGPARAGKA ISMVVAGGVV AAFLGPQLGV
WGRDWVAGQI FVGSYLAQAG LSLVAFALLL LLRLPPEAQQ DTGHARPLAD ILRQPVLGVA
IFGAAIGYAV MIMVMTATPL AILGCGLPES DVAPVIQWHV VGMFAPSFFT GALIARFGAP
RVMQAGFVLL LGHVALVLSG VEFLHFLSGL VLLGVGWNFA FIGGTTLLTQ SYRPAERLKV
QAVNEFAVFG FAALATLSAG WLYDRFGWAV LNVAVIPLLL AALLAAIAIE RQFRRAALAT
|
|---|
| |