| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2730 |
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| Symbol | |
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| ID | 3672795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2808898 |
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| End bp | 2811675 |
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| Gene Length | 2778 bp |
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| Protein Length | 925 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637711437 |
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| Product | dihydroxyacid dehydratase |
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| Protein accession | YP_316488 |
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| Protein GI | 74318748 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
[COG0676] Uncharacterized enzymes related to aldose 1-epimerase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.73004 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACT ACCGTTCCTG GACCACCACC CGCGGCCGCA ACATGGCCGG CGCCCGCGCG
CTCTGGCGCG CGACCGGCAT GAAGGATGGC GATTTCAACA AGCCGATCAT CGCGATCGCC
AACTCGTTCA CGCAATTCGT CCCCGGCCAC GTCCACCTCA AGGACATGGG CCAGCTCGTC
GCCCGCGAGG TCGAGGCGAT GGGCGGCGTG GCGAAGGAGT TCAACACCAT CGCGGTCGAC
GACGGCATCG CGATGGGTCA CGGCGGCATG CTCTATTCGC TGCCTTCGCG CGACCTCATC
GCCGATTCGG TCGAATACAT GGTCAACGCG CACTGCGCCG ACGCCCTCGT CTGCATCTCG
AACTGCGACA AGATCACGCC CGGCATGCTG AACGCGGCGC TGCGCCTCAA CATCCCGACC
GTGTTCGTTT CGGGCGGGCC GATGGAAGCC GGCAAGGTCG TGTGGGAAGC GAAGACCATC
AAGCTCGACC TCGTCGACGC GATGGTCTCG GCGGCCGACG CGAAATTCAG CGACGCCAAG
GTTGACGAGC TCGAGCGCTC GGCGTGCCCG ACCTGTGGTT CGTGCTCGGG CATGTTCACC
GCCAACTCAA TGAACTGCCT GACCGAGGCG CTCGGGCTCT CGCTGCCCGG CAATGGCTCG
CTGCTCGCAA CGCACGCCGA CCGCAAGAGC CTGTTCCTCG CCGCCGCGCG CCTGATCGTG
AAGAACGCGC GCCGCTATTA CGACGACGGC GACACGCGCG TATTGCCGCG TTCGATCGCG
AGCTTCGACG CCTTCGAGAA TGCGATCGCG CTCGATATCG CGATGGGCGG CTCGACCAAC
ACCGTGCTGC ACCTGCTCGC CGCGGCGCAC GAGGCCGGCG TCGACTTCAC GATGGCCGAC
ATCGACCGCA TGAGCCGGCG CGTGCCCCAC CTGTCCAAAG TGGCGCCGTC GATCCAGACC
TACCACATGG AAGACGTGCA TCGCGCCGGC GGCGTCATGG CGATCCTCGG CGAACTCGAG
CGCGCCGGCC TCGTCCACCG CGACGTGCCG ACCGTGCTCA TGAAGACGCT CGGCGAGCAG
ATCGACGTCT ACGACATTCG ACGCACGAGC GACCCCGACG TCAAGGACTA CTTCCGCGCG
GCGCCCGGCG GCGTGCCGAC GCAGACCGCG TTCTCGCAGG CGCGCCGTTT CGCCACGCTC
GACGACGATC GCGTCAACGG CTGCATCCAC GACGTCGAGC ACGCGTATTC GAAGGACGGC
GGGCTGGCTG TGCTCTACGG CAACATCGCG CTCGACGGCT GCATCGTCAA GACCGCGGGT
GTCGACGAGA GCATCTGGAA GTTCTCGGGT CCCGCGCGCG TGTTCGAATC GCAGGACGCG
GCGGTCGAGG CGATCCTCGG CGACCGCATC GTTGCTGGCG ACGTCGTCGT GATCCGCTAC
GAAGGCCCGC GCGGCGGGCC CGGCATGCAG GAAATGCTCT ACCCGACCAG CTACCTCAAG
TCGAAAGACC TCGGCAAGGC GTGCGCACTG ATCACCGACG GCCGCTTCTC GGGCGGCACC
TCGGGCCTGT CGATCGGCCA CGCCTCGCCC GAGGCGGCGG AAGGCGGCAC CATCGGGCTG
GTCGAGGAAG GCGACACGAT CGAGATCGAC ATCCCCAATC GCAGCATTCG TCTCGCGGTC
AGCGACGCCG AGCTCGCACG GCGCCGGGCC GAAATGGACG CCAGGGGCGC CCAGGCCTGG
AAGCCGGTCA ACCGCACGCG CCAGGTCTCC GCGGCCCTGC GTGCGTATGC CGCGATGACG
ACCTCGGCCG CGTTCGGCGC GGTGCGCGAC GTCTCCCAGG TCGAGCATCC GACCGAGGCG
CAGGAACACG CCGATCCGCG CGCGCGCTTC GCGATCCCGG GCCAGTTGAG TTTCCGCACC
GGCGCCGGCG GCCTCGTCTA CGCCGACATA GACAACGCCG GCGGACGCGC GACGATCTGC
CTGCAGGGTG CCCACGTCGT GAGCTTCCGT CCGAAGTCGC AGCACACACC GGTGATCTGG
GTGTCGGACG CGGCGAAGTT CGCGCCCGGC AAGTCGATAC GCGGCGGTGC ACCGGTGTGC
TGGCCGTGGT TCGGCGCGCA TCCGAGCGAG GCGTCGTTTC CCGCCCACGG TTTCGCGCGC
ACGGTCGAGT GGCAGGTCGT CGGCAGCCGC AAGCGCAACG ACGCGCGCAC CGAGATCACG
CTCGAACTGC TCGACAACGC GCAGACGCGC GCGCAATGGC CGCACCCCAC GCGGCTCACG
CTGACGATCG TCGTCGGCGA GCGCCTCGAA ATGCGCCTGA CGACGACCAA CGCGGGCGAT
GCGCCGATCG AGGTCGGCGA GGCCCTGCAC ACCTATTTCC AGATCAGCGA CATCGGCGCG
GTCAGTGTCG AGGGGCTCGA GGGCGGCGAC TATCACGACA AGGTCGAGAA CTTCGCGCGC
AAGACACAGC GCGGCGCCGT GACCTTTGCC GGTGAAGTCG ACCGCGTCTA CGTCGATACG
CCGGCCGAAT GCGTCATCGT CGATCCGGGT CTCGCGCGGC GCATCCGTAT CGCCAAGAGC
GGCTCGCACT CGACCGTCGT GTGGTCGCCC TGGACCGCCA AGGCCGAACA GATGGGCGAC
CTCGGGCAAG GCAAATCCGG CACGGGCTGG CGCGAGATGG TCTGCGTCGA GTCGGGCAAT
GCGATGGACA ATGTTGTCAC GGTCGCGCCC GGCGCGAGTC ACACGCTCGC GGTGACCTAC
AGCGTCGAGG CGCTCTAG
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| Protein sequence | MPDYRSWTTT RGRNMAGARA LWRATGMKDG DFNKPIIAIA NSFTQFVPGH VHLKDMGQLV
AREVEAMGGV AKEFNTIAVD DGIAMGHGGM LYSLPSRDLI ADSVEYMVNA HCADALVCIS
NCDKITPGML NAALRLNIPT VFVSGGPMEA GKVVWEAKTI KLDLVDAMVS AADAKFSDAK
VDELERSACP TCGSCSGMFT ANSMNCLTEA LGLSLPGNGS LLATHADRKS LFLAAARLIV
KNARRYYDDG DTRVLPRSIA SFDAFENAIA LDIAMGGSTN TVLHLLAAAH EAGVDFTMAD
IDRMSRRVPH LSKVAPSIQT YHMEDVHRAG GVMAILGELE RAGLVHRDVP TVLMKTLGEQ
IDVYDIRRTS DPDVKDYFRA APGGVPTQTA FSQARRFATL DDDRVNGCIH DVEHAYSKDG
GLAVLYGNIA LDGCIVKTAG VDESIWKFSG PARVFESQDA AVEAILGDRI VAGDVVVIRY
EGPRGGPGMQ EMLYPTSYLK SKDLGKACAL ITDGRFSGGT SGLSIGHASP EAAEGGTIGL
VEEGDTIEID IPNRSIRLAV SDAELARRRA EMDARGAQAW KPVNRTRQVS AALRAYAAMT
TSAAFGAVRD VSQVEHPTEA QEHADPRARF AIPGQLSFRT GAGGLVYADI DNAGGRATIC
LQGAHVVSFR PKSQHTPVIW VSDAAKFAPG KSIRGGAPVC WPWFGAHPSE ASFPAHGFAR
TVEWQVVGSR KRNDARTEIT LELLDNAQTR AQWPHPTRLT LTIVVGERLE MRLTTTNAGD
APIEVGEALH TYFQISDIGA VSVEGLEGGD YHDKVENFAR KTQRGAVTFA GEVDRVYVDT
PAECVIVDPG LARRIRIAKS GSHSTVVWSP WTAKAEQMGD LGQGKSGTGW REMVCVESGN
AMDNVVTVAP GASHTLAVTY SVEAL
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