Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2727 |
Symbol | |
ID | 3672792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 2805408 |
End bp | 2807429 |
Gene Length | 2022 bp |
Protein Length | 673 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637711434 |
Product | hypothetical protein |
Protein accession | YP_316485 |
Protein GI | 74318745 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1331] Highly conserved protein containing a thioredoxin domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.461963 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAATC GACTCGCCAG CGAACAGAGC CCCTATCTGC TGCAACACGC CGACAACCCG GTCGACTGGT ACCCCTGGGG CGACGAGGCG CTCGAGAAGG CGCGACGCGA GGACAAGCCC ATCCTGCTGT CGATCGGCTA TTCCGCGTGT CACTGGTGCC ACGTCATGGC CCACGACTGC TTCGAGGACG CCGAGGTCGG GGCGGTCATG AACCGCCTCT TCGTCAACAT CAAGGTCGAT CGCGAGGAGC GCCCCGACCT CGACCAGATC TATCAGACCG CCCACCAGCT GCTCGCCCAG CGGGGCGGCG GCTGGCCGCT GACCGTGTTT CTGACGCCGG ACCAGACACC GTTCTTCGCC GGCACCTACT TCCCCAAGAC CGCGCGCTAT CAGCTGCCTG GCTTTCCCGA ACTGATGGAG AACGTCGCCC ACGCCTGGCA CGCACGCCGC GGCGAAGTGC TCGCGCAGAA CGATGCGGTG CGGGCGGCCT TGGCGCAGTC GCAGTCGCAA CCCGCGGCGT CGGCGTCGAC ACCGCTCACC GCCGCGCCGC TCGAGCAAGG TGTGCGCGAT CTCGCGCAGG CTTTCGATCC GGTGTGGGGC GGCTTCTCGC GCGCGCCGAA ATTTCCGCGC CCGGGCGAGC TGTTCTTCCT GCTGCGCCGT GCGCAGGGCG GCGATGCGAA GGCCCGCGAG ATGGCGCTAT TCACGCTACG CAAGATGGCC TCCGGCGGCG TCGTCGACCA GCTCGGCGGC GGCTTCTGCC GCTATTCGGT CGATGAAGAA TGGGCGATCC CCCACTTCGA GAAGATGCTC TACGACAACG GCCCGTTGCT GCATCTCTAC GCCGACGCGT GGGCGCTGAG GGGCGAGACG CTGTTCCGCG AAACCGCGGA GGGCATCGTC GCCTGGCTGC TGCGCGAGAT GCGCGCACCT GAAGGCGGCT TCTACTCCGC GCTCGACGCC GACAGCGAAG GCCATGAAGG CAAGTTCTAC GTCTGGTCGC GCGAAGAAGT GAAAAGTCTG CTGACGCCCG ACGAGTACGC GGTCGCGGCG CCGTTCTATG GCTTCGACGC GCCGCCGAAT TTCGAGAACA CCTCCTGGAA TCCGCTCCGC GCGCGTCCGC TCGAGGAGAT CGCCGCCGCG CTCGGCCTTT TTCCCACGGA CGCAGAGGCG CGCGTCGCCG CGGCGCGGCG CAAGCTGTTC GCGGCACGCG AGTCGCGCAT CCGTCCCGGC CGCGACGACA AGCAGCTCAC GAGCTGGAAC GCGCTGATGA TCGGCGGCCT TGCCCACGCC GGGCGTGTCA TGGCGCGCCC CGAGTGGGTC GCGGAAGCGC ACGCCGCGAT CGACTTCCTG CGCCGCAACC TGTGGCGCGA CGGCCGCCTG CGCGCGACCT TCAAGCGGGG CGAAGCGCGC CTCAACGCCT ATCTCGACGA CTACGCCTTC CTCGTCGACG CCTTGCTCGA AACGATGCAG GCGGCTTACC GCGAGGCGGA CATGGCGTGG GCGCAGGAAC TCGCCGACGC GCTGCTCGCG CACTTCGAAG ACCGCGAGGC GGGCGGCTTC TTCTTCACGA GCCACGACCA CGAGGCCCTG CTGACACGGC CCAAGCCCGG GTACGACAAC GCGACGCCTT CCGGCAACGG CGTCGCCGCG TTCGCGCTGC AGCGTCTCGG CCATCTGCTC GGCGAGACGC GTTATCTCGA CGCCAGCGCA CGCTGTCTGC GTCTGTTTCT GCCGCAGGTC GTGCAGCAGC CGATCGCCCA TCCGACGCTG CTCGCCGTGC TCGACGAGGC GCTCCGGCCG CCGCGTGTGA TCGTGCTGCG TGGCCCCGAC ACGCCCGTGC AGGAATGGGC CGCGAACCTC GCGCCGCGAC TCGGTGCGCG CGACATGCTG CTGGCCCTGC CCAACGGCGA GGGCGCTCCG GGCGCGCTCG CCAAGCCCGA AGCGCCGCAG CCGACGGCGT GGATCTGCAG TGGCACCGCC TGCCAGCCGC CGATCACCGA GCTTGCGGCG GTGCTTGCCT GA
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Protein sequence | MPNRLASEQS PYLLQHADNP VDWYPWGDEA LEKARREDKP ILLSIGYSAC HWCHVMAHDC FEDAEVGAVM NRLFVNIKVD REERPDLDQI YQTAHQLLAQ RGGGWPLTVF LTPDQTPFFA GTYFPKTARY QLPGFPELME NVAHAWHARR GEVLAQNDAV RAALAQSQSQ PAASASTPLT AAPLEQGVRD LAQAFDPVWG GFSRAPKFPR PGELFFLLRR AQGGDAKARE MALFTLRKMA SGGVVDQLGG GFCRYSVDEE WAIPHFEKML YDNGPLLHLY ADAWALRGET LFRETAEGIV AWLLREMRAP EGGFYSALDA DSEGHEGKFY VWSREEVKSL LTPDEYAVAA PFYGFDAPPN FENTSWNPLR ARPLEEIAAA LGLFPTDAEA RVAAARRKLF AARESRIRPG RDDKQLTSWN ALMIGGLAHA GRVMARPEWV AEAHAAIDFL RRNLWRDGRL RATFKRGEAR LNAYLDDYAF LVDALLETMQ AAYREADMAW AQELADALLA HFEDREAGGF FFTSHDHEAL LTRPKPGYDN ATPSGNGVAA FALQRLGHLL GETRYLDASA RCLRLFLPQV VQQPIAHPTL LAVLDEALRP PRVIVLRGPD TPVQEWAANL APRLGARDML LALPNGEGAP GALAKPEAPQ PTAWICSGTA CQPPITELAA VLA
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