| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2697 |
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| Symbol | |
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| ID | 3672426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 2778336 |
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| End bp | 2779649 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637711403 |
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| Product | type I secretion outer membrane protein, TolC |
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| Protein accession | YP_316455 |
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| Protein GI | 74318715 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACTCA AGCCCCTGTT TCTTGCCCTG AGCCTCACGC TGGCGACCAG CGCCGGCGCC
GCGAACCTGA CCGAGGTCTA CCGCAGCGCA CAGGCCTACG ACGCGACCTT CGCGTCGGCG
CGGGCCGCCT ATCGGGCCGG GCAGGAGGCG GTCGCGCAGG GCCGCGCGGG ACTGCTTCCC
AACGTCGCGC TCGACGGCAA CCTGCGCTAC AACAGCCTTG ATTCGAGCCT GCCCGGCGGC
GACGCCGACT ACGACTCCAA TGGTGCCTCG GTCAACGCCG CCCAGCCGCT TTTCCGCAAG
CAGAATTGGG TGCAGTACGC GCAGGCGAAA GAGCAGGTGA AGATCGCCGC GAGGCAGTTC
GAGGTCGCCG AGCAGGATCT GATCCTGCGT GTCGCGCAGG CCTACTTCGA CGTGCTGCTG
TCGCAGGACA CGATCGCGTT CATCAACGCG CAGAAGGCCG CGATCACCGA ACAGCTCGCG
GCGGCCAAGC GCAACTTCGA GGTCGGCACC GCGACCATCA CCGACACCCA CGAAGCGCAG
GCGCGCTACG ACCTTGCACT CGCCCAGGAG ATCGCCGAAC AGAACACGCT CGATATCCGC
CTGCGCGCGC TCGAAAAAAT CATCGGCGCC CCGCCCGGCG CACTCGACCG CCTGGCCGAA
CCGGTGCGCC TTGCTCCGCT CGCGGGCACT ATCGAGGAAT GGGCCGATCG CGCCGCCGAA
GGCAACCTGC AGGCGGAGAT CCAGCGCATC GCGAAGACCA TCGCCGACCA GGAAGTCGAG
CGCAATCGCG CCGCGCGCTA TCCCACGGTC GACGCGGTCG CCGGCTACAG CGTCAACAAC
AACCAGGCTT TCGGCAACCT GCAGGTCGAT ACGCGCGCCG CGAGCGTCGG ACTCGAACTC
AACATGCCGA TCTACCAGGG CGGGCTGATC AGTTCGCGCG TGCGCGAGGC GGTCGCCAAT
CAGGAAAAGG CACGTCACGA TCTCGAGGCC GCGATTCGTG ACGCGAGCCT GCAGGCGCGC
GAGGCCTATC TCAACGTCAG CAGCGGCGTC GCCCGTGTGC GCGCGCTCGA GCAAGCCTTG
ACCTCGACGC AGGCCCAGCT CGACTCGACC AAACTCGGCC TCGATGTCGG CGTGCGCACG
AACCTCGACG TGCTCAACGC CGAACAGCAG GTGCTCTCGG CGCGGCGCGA CCTCGCCGCC
GCGCGCTACG AATACCTGCT TTCGGGTCTC GCACTGAAGG CCGCGGTCGG CACGCTCGGC
CCCGCCGAAC TCCTAGAGAT CGATCAGCAC CTCCATCCGG TCGCCGCGCG CTGA
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| Protein sequence | MPLKPLFLAL SLTLATSAGA ANLTEVYRSA QAYDATFASA RAAYRAGQEA VAQGRAGLLP
NVALDGNLRY NSLDSSLPGG DADYDSNGAS VNAAQPLFRK QNWVQYAQAK EQVKIAARQF
EVAEQDLILR VAQAYFDVLL SQDTIAFINA QKAAITEQLA AAKRNFEVGT ATITDTHEAQ
ARYDLALAQE IAEQNTLDIR LRALEKIIGA PPGALDRLAE PVRLAPLAGT IEEWADRAAE
GNLQAEIQRI AKTIADQEVE RNRAARYPTV DAVAGYSVNN NQAFGNLQVD TRAASVGLEL
NMPIYQGGLI SSRVREAVAN QEKARHDLEA AIRDASLQAR EAYLNVSSGV ARVRALEQAL
TSTQAQLDST KLGLDVGVRT NLDVLNAEQQ VLSARRDLAA ARYEYLLSGL ALKAAVGTLG
PAELLEIDQH LHPVAAR
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