| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2634 |
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| Symbol | |
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| ID | 3672363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2705731 |
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| End bp | 2708262 |
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| Gene Length | 2532 bp |
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| Protein Length | 843 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637711340 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_316392 |
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| Protein GI | 74318652 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCCC CGCCCGTGGA CGCCGTCCGC GCCCTGGAAT GCGCGCTGAG CCTGTGTCGG
CAAGAACTGG CCGAGAGTCG CGGGCGTGCG CAGGGGCTCG CGCTTGCCGA AGCGGTGTTC
ACCCACGCCG CCAATCCGCT CGCCGTGCTC GACCGTCACT ACGACTTCCT GCGCGTCAAC
GACGCCTACG CGCGCTGTTG CGGCAAGCCC GTCGAGGCCT TCGCCGGCCG CAACCACTTC
GAGATGTTCC CCTCGGATGC GCGCCTCGTT TTCGACGACG TCGTCCAGAA CAAGCCCGCA
TCCACGACCT TCACGCGTGC GCTCATCTTT CCAGATCAGC CCGAGCGCGG TGTGAGCTAC
TGGGACTGGA CGCTGGTGCC CGTCCTCGAC GCGGACGGCG AGGTCGACGC CCTCGTTTTG
TCGCAGGTCG ACGTGACCGA GCGCGAGGCC GGGGCCGACG CATTGCGCCA GAGTGAGGCG
CGCTATCGGC GGCAGGCGGC CGAGCTCGAA TTGATCTACC GCACCGCGCC GGTCGGCCTG
TGCGTGCTCG ACACGCAATT GCGCTACGTC CACATCAATG AACACCTGGC CGAGTTCGAT
CGTCTGCCGG TCGAGGAGCA TCTCGGCAAG ACGATACGCG AGACGCTGCC GGACACCGCG
GCTCGGGTCG AACCGCTGCT GCGCCGCGTA CTCGAAACCG GCGAACCGGT GCTCGACCTC
GAGGGCAGGG GCGAGACGGA ACCGGGCGTC TGGCGCCACT GGAACAGCCA GTACTGGCCG
CTCAAGTCGG CCGACGGCCG GGTGTACGGC ATCAACGTCG TCGTGGAAGA AATCACCGAA
CGGCGGCGCC TGGAGGAAAC GCGCCAGCGC GAACAAGCGT TTCGCAGCCT CGCCGAGAAT
TCGAGCGACA TCATCTCCCG CTTCGACCGC GAGCTGCGGC GGATCTACGT CAACCCGGCG
ATCGAGGCGA TTCTGGACCG CCCGCGCGAG ACGCTGATCG GCAAGACCCA CCACGACCTC
GGCCTTCCCG AAGCGCTCGC GGCCGCGCTC GACCGCCCGC TCGCCATGGT GTTCGAGACC
GCGCAGCCGC TGGCCGCGGA AGCCGTCGTG CCGACGCCGA AGGGCGAGCG CTACCTCGAG
GCGCGCATCG TGCCGGAATT CGATGCGAGC GGCGCCGTCG AGACCGTGCT CGCGATCACG
CGCGACCTCA CCGAACGCAA GCGCGCCGAG GAGGCCCTGC AGGCGAGCGA GCGCAAGTAT
CGAGCGCTGG TCGAGAACCT CTACGAAGGC GTGTGGCTGC TCGACACCGA AGCCGACACG
ACCTTCGTCA ACGCGCGACT TGCCGAACTG CTCGGCTACC CGGCGACGGA AATGCTCGGG
CGTTCGGTGT TCAGCTTCAT GGACCCGGAG CAGGTCGAGG CGATGCGCGG GAATCTCCTG
CGCAGCGCGG CCGGGACGCG TGCCGAGTAC GACTTCGAAT TCCGCTGCAA GAGCGGCGAA
CCGATCTGGA CCCGCGTCGC CGCGACGCCG ATCGTCGACG AGGGCGGCCG CTACCAGGGG
ACGCTGATCG CGCTCATCGA CATCACCGAA CGCATCCGCT CGGCCGAGGC GCTCCACCGC
CGCGAGCAGG AATTCGCCGC CCTGGTCGAG CGCTCGCCCG ACATCATCGC GCGGGTCGAC
GCGTCGCTGC GCCTGCGTTA CGTCAATCCG GCGATCGAGC GGCTCACCGG CCGGCCGCGC
GACTGGTTCA TCGGCAAGAC CCCGGGCGAG CGCGAACTGT CGCCGGAAGA GGCGCGCTTG
CGCGAGGCCA CGCTCCGCGC CGTGTTCGAA AGCGGTGAGG AAAGGATCGT CGAGCAACGC
AACCCCTCGC TGAACGGCGA GCGCATCTTC CAGACACGGC TGGTGCCCGA GTTCGGCCCC
GCCGGCAAGG TCGAGTCCGT GCTGGTCGTC GAGCGCGACA TCGACGACCT CAAGCGCGCG
CAGGAGGCGC TCGAGGAACT GACGCTGCTC GACCCTTTGA CCGGCGTCGC CAACCGCCGC
TTTCTCGAGC GCTTCGTCGG GCGCGAGTGG ATGCGCGAGG CGCGCCAGCG CCTGCCGATC
GCCGCGGTCA TGGTCGACAT CGACCATTTC AAGGATTACA ACGACCACTA CGGCCATGCG
CAGGGCGACG CCTGCCTGCG CACCGTGTCG CAGACGTTGC GCGGCGCGCT GCACAGGCCT
GCCGACATCC TCGTCCGCTA CGGCGGCGAG GAATTCATCG TTCTGCTGCC CGAGAGCGAT
CTGGCTGCTG CGCGCGAAAT CGCCGAGCGC CTGCGGCAGG CCGTCGAGGC GCTCGCGCTG
CCGCATCCGA CCTCCCCGAT CGGCGACCGC GTGACGATCA GCCTCGGCGT GGCGGCGGTG
CAGGCCCACG AAGGCGAATT CGATCAACTG CTGATCGCCG CAGACGCGGC GCTCTACCGC
GCCAAGAAAA AGGGGCGCAA TCGGGTCGAG GCGAGCGGGG CGCCCGCGGC CGATGCGGCG
CGCCCACCGT GA
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| Protein sequence | MTAPPVDAVR ALECALSLCR QELAESRGRA QGLALAEAVF THAANPLAVL DRHYDFLRVN
DAYARCCGKP VEAFAGRNHF EMFPSDARLV FDDVVQNKPA STTFTRALIF PDQPERGVSY
WDWTLVPVLD ADGEVDALVL SQVDVTEREA GADALRQSEA RYRRQAAELE LIYRTAPVGL
CVLDTQLRYV HINEHLAEFD RLPVEEHLGK TIRETLPDTA ARVEPLLRRV LETGEPVLDL
EGRGETEPGV WRHWNSQYWP LKSADGRVYG INVVVEEITE RRRLEETRQR EQAFRSLAEN
SSDIISRFDR ELRRIYVNPA IEAILDRPRE TLIGKTHHDL GLPEALAAAL DRPLAMVFET
AQPLAAEAVV PTPKGERYLE ARIVPEFDAS GAVETVLAIT RDLTERKRAE EALQASERKY
RALVENLYEG VWLLDTEADT TFVNARLAEL LGYPATEMLG RSVFSFMDPE QVEAMRGNLL
RSAAGTRAEY DFEFRCKSGE PIWTRVAATP IVDEGGRYQG TLIALIDITE RIRSAEALHR
REQEFAALVE RSPDIIARVD ASLRLRYVNP AIERLTGRPR DWFIGKTPGE RELSPEEARL
REATLRAVFE SGEERIVEQR NPSLNGERIF QTRLVPEFGP AGKVESVLVV ERDIDDLKRA
QEALEELTLL DPLTGVANRR FLERFVGREW MREARQRLPI AAVMVDIDHF KDYNDHYGHA
QGDACLRTVS QTLRGALHRP ADILVRYGGE EFIVLLPESD LAAAREIAER LRQAVEALAL
PHPTSPIGDR VTISLGVAAV QAHEGEFDQL LIAADAALYR AKKKGRNRVE ASGAPAADAA
RPP
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