Gene Tbd_2610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2610 
Symbol 
ID3672586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2684512 
End bp2685777 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content70% 
IMG OID637711316 
Productperiplasmic sensor Signal transduction histidine kinase 
Protein accessionYP_316368 
Protein GI74318628 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.69998 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTTA GCCGCAGCCT GCGTTTCCGC GTCGCGACCG CGTTCGCGAC GATCGGCGGC 
GTCATCAGCC TGGTCGCCGC GGTCGGGCTT TATGTCGCGG TGCGCGACGC CGGCGAGCGC
CTCATCGACG AGACGATGAA CGCCGAGATC GAGGACTACC TGTCGCGCCG CAACCGCAAT
CCGAACTCGC CGCCGCCGCT CACCGCCACG CTGCGCGGCT ACGTCCTGCC GGCGCGGCCC
GGCCAGCCGG CGCCGCCGCG CGCCATCGCC GGGTGGCCGC CGGGACGCTA CGAGATCCGC
CTCGGCGAGG TGTTCTACCG CGTCGCGATC ACCGACCGCG GGGCCGGGCG CTACTTCCTG
CTCTACAACG AGACGCTGTT TCGTCAGAAG CAGGCCGACC TCATCCTCTA TCTCGCGCTC
TTCGTCGTGT TGATGACGCT GCTCTCGGGC GGCCTGGCGC TATGGCTCGC CGAGCGCGTG
ATCGAACCGG TCAAGGAGCT TGCCCGGCGC ATCCGCGAAG TGCGCCCCGA TGCCCATCCG
GTACCCCTGA GCGCCGATTT CCCGCACGAC GAAGTCGGTG AACTCGCCCA CGCCTTCGAC
CAGGCACTCG ACCGCCTCGC CGACTTCATC GATCGCGAGC GCGCCTTCAC CGCCGACGTC
TCGCACGAAC TGCGGACGCC GATCGCGGTC ATCCGCGGCG CGGCAGAAGT CCTGCTCGCC
GACGCGTCGC GCCCGGAAAA GGAGCGTCAG CGCCTCGAAC GCATCGAGCG TGGCGCCGCC
GACATGGCTG ACCTGTCGAC CGCGCTGCTG GCGATGGCGC GCGAGCGCGA CGACGAGCGG
CGCGCGCCGC TCGATCTCGC CGCGCTGGTC GAGGCCGCGG TCGACAAGCA CCAGCATCTG
CTCGGCGCGC GCCCGGTCGA ACTCACGCTC GAACTGGCCG ACCGCCCACA GGTCGTCGCC
GATTCCAACC TGGTATCGAT CGTCGTCGCC AACCTGCTGC GCAACGCCTT CACCTACACC
GAGCGCGGCA GCGTCCATAT CCGCCTCGAC GCGACGACGC TGACCGTCAC CGACAGCGGA
CTCGGCATCC CGCGCGCCGC GCTCGACAAG GTGTTCCAGC GCCTGTACAA GGGTACGCAC
AGCGAGGGCG CGGGCATCGG CCTTTCGCTC GTGAAGAAGA TCTGCGACCG CTACGGCTGG
TCGATCGCGC TCGACAGCGA GGAAGGGCAG GGGACCCGCG CCGTGCTGCG ATTTCGCGCG
CCTTGA
 
Protein sequence
MRFSRSLRFR VATAFATIGG VISLVAAVGL YVAVRDAGER LIDETMNAEI EDYLSRRNRN 
PNSPPPLTAT LRGYVLPARP GQPAPPRAIA GWPPGRYEIR LGEVFYRVAI TDRGAGRYFL
LYNETLFRQK QADLILYLAL FVVLMTLLSG GLALWLAERV IEPVKELARR IREVRPDAHP
VPLSADFPHD EVGELAHAFD QALDRLADFI DRERAFTADV SHELRTPIAV IRGAAEVLLA
DASRPEKERQ RLERIERGAA DMADLSTALL AMARERDDER RAPLDLAALV EAAVDKHQHL
LGARPVELTL ELADRPQVVA DSNLVSIVVA NLLRNAFTYT ERGSVHIRLD ATTLTVTDSG
LGIPRAALDK VFQRLYKGTH SEGAGIGLSL VKKICDRYGW SIALDSEEGQ GTRAVLRFRA
P