| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2531 |
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| Symbol | |
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| ID | 3671850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2600751 |
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| End bp | 2603819 |
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| Gene Length | 3069 bp |
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| Protein Length | 1022 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637711237 |
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| Product | transmembrane drug efflux protein |
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| Protein accession | YP_316289 |
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| Protein GI | 74318549 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.231236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.199392 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCGG CGCCGCGCTT CGTGCCGGGC GCCGGCAACC TGTCGCGTTG GGCGATCGAA
CACCCCGCGC TGGTCCGGTT CTTCGTCGTG CTGATCCTGC TGCTCGGGGT GCGGTCGTAT
TTCCAGCTCG GCCAGGCCGA GGACCCGCCG TTCACCTTCA AGACCATGCT GATCCAGGCC
GAATGGCCCG GCGCGAGCGC GCAGGAGGTC TCGGAGCAGC TGACCGAGCG CATCGAGAAG
AAGCTGCAGG AGATGCCCGA ACTCGATTAC GTGCAGAGCT ACGCCAAGCC GGGCGAAACG
GCGCTCTTCG TCAATCTCAA GGAAACCGTG CGCGGGCGCG ACGTCGCCGA CGCCTGGTAC
CAGGTCCGCA AGAAGATCGG CGACCTCGCG CCGCAACTGC CCGCTGGCGT GCGCGGCACC
TTCTTCAACG ACGAATTCGG CGACACCTTC GGCTCGATCT ACGCCTTCAC CGGCGACGGC
TTCAGCCGCG CCGAGCTGCG GCGGGCCGCC GAAGACGCGC AGCGCGAAGT GCGCCGCCTG
CCCAATGTCG GCAAAGTCGA GCTGTTCGGC GTCGTTCCGG AGAAGATCTA CGTCGACATT
CCGACGCAGA AGCTCGCGAC GCTGGGGCTG ACGCTCGAAC AGATCAGCAC GGCCATCGAG
GCGCAGAACG GCATCGTCGC GAACGGCCGC GTCGAGAACG ACAGGTTGTC GATTCCGCTA
CGTCTGTCGG GGTCGTATTC CGACGTCGAG CGGGTGCGCG AAACCGTGCT GCGCGCGGGC
GCGCAAAGCC TGCGCCTGGG CGACATCGCC GAGGTGAAGC GGCGCTACGA GGATCCGCCC
GCGAACGAAA TCCGCTCGCA GGGCGAGCCG GCGGTGCTGC TCGGGGTGTC GCTGGCCGAC
GGCGGCGACG TGCTCGCGCT CGGCCGCGAC GTCGGCGCGG CGATCGCCGC ACTGCAGAAA
AACCTGCCGC TCGGCCTCGA GATCCGCAAG ATCCACGACC AGCCGCAGAT CGTCGAGAGC
GCGGTCGGCC TCTTCATGAA GGCCTTCGCC GAGGCGGTCG CGATCGTGCT GGCGGTGACC
TTCCTCGCGC TGAAATGGCG CGCGGGGCTC GTCGTCGCGC TTTCGATCCC GGTCGTGCTC
GCGATCACCT TTACCGCGAT GTGGTTCTTC AACATCGACC TGCATCGTAT TTCGACCGGC
GCGTTGATCA TCGCGCTCGG CCTTCTGGTC GACGACGCGA TCATCGCGGT CGAGATGATG
GCGCACAAGC TCGAGGCGGG CTGGAGCCGC TTCGAGGCGG CGACCTATGC CTTCCAGTCG
ACCGCGTTCC CGATGCTGAC CGGGACCCTG CTCACGGCGA CGGCTTTCCT GCCGATCGCG
CTCGCCAAGT CGGTCGTCGG AGAATATACC TTCGCGATTT TCGCCGTCAC GACGATCGCG
CTACTGTCGT CCTGGCTCGT CGCCGTGGTC GTCACCCCTT ACTTCGGCCA TGCCCTGCTG
AAGCCGACGC ACCATGTCGA AGATGAGGCC GATGCCTACC GCACACCCTT CTACCGGCGC
TTCCGCGCCG CGGTCGGCTG GTGCGTCACG CGGCGCTGGA CCGTGATCGG GCTCACGCTG
GTCGCCTTGG TCGTCGGCGT CGCGGCGATG CAGCGTGTCG AGAAGCAATT CTTCCCGGCC
TCCGACCGGC TCGAGATCCT GGTCGAGATG TGGCTGCCGG AAGGGGCGTC CTACGACGCG
ACGCACGCGG CCGCGGTGCG GCTCGAAACG CTGTTGCGTT CCGACAAGGA CGTCGCCCAC
GTGCTCAACT ACATCGGCCA GGGCGCCCCG CGCTTCGTGC TCGGTCTCGA CCAGCGCCTC
GCCAACCGCA ACTTCGCCCA GCTTGTCGTG ATCGCGCAGG ACGTCGAAGC GCGCGAGCGC
GTCATCACGC GCATCCGGGG CCTTTTCGAA AGCGATTTCC CGAACGTGCG CGGCCGCGCG
GTGCGCTTCG AATACGGACC GCCGTCGGGC TATCCGGTGC AGTACCGGCT CTCGGGCAGC
GACATCCCGC GGCTGAAGGC GGAGGCCGAA AAGCTGCGCC GCATCCTCGT CGCGCAGCCG
CAGACGACGG CCGTGAACCT CGACTGGAAT GAACAGGCGC TCGCGGTGAA GGTCGAGCTC
GACCAGGACA AGCTCAAGGC CCTCGGCCTC AGCTCCAACG CGGTCGGCCG GCTCGTCGCG
CTGCAGCTGT CGGGGTTCGT CGCGACCCAG TTCCGCGAGG ACGATTTATT GATCGACGTC
GTGCTGCGCG CGCCGCGCGC CGAGCATCGC GACGTCGACG CGCTGCGCGC GATCCCGGTC
GGCCGCTTCG ACGGCCGCAG CGTGACGCTC GGCCAGGTCG CGACCTTCGA GCCCGGCTTC
GAGGACGGCG TGATCTGGCG ACGCGACCGG CTGCCGACGA TCTCGGTGCG CGGCGATCCG
ATCGGAACGG TCCAGCCGGC GACAATCATC GATTCGATCG CGCCACAGGT CGCCGCCTTC
AAGGCGCAGC TGCCGCCCGG TTTCCGGCTC GAGGTCGGCG GCCCGGTCGA GAGCAGCGCC
AAGGCGAACG CCGCGATCGG CGCGTCGTGG CCCTTGATCG TGATCACGAC GCTGACGCTG
CTGATGCTGC AGCTCGGCAG CTTTTCGCGC TCGCTGCTGG TCGTGCTGAC CGCGCCGCTC
GGGCTGATCG GCGTGGCCAT CGCGCTGCTC GTGAGCGGCC GGCCGATGGG CTTCGTCGCG
CTGCTCGGCA TCATCTCGCT CGCCGGCATG ATCATGCGCA ACTCGGTCAT CCTCGTCGAC
CAGATCCGCC AGGACCTCGC GCGCGGTCTG TCGCAGTGGG ACGCGATCGT CGAATCGACG
GTGCGGCGCA TGCGCCCGAT CAGCCTGACC GCGGCGGCCG CCGTACTGGC TATGATTCCC
TTGTCGCGAT CGATTTTCTG GGGGCCGATG GCCGTGGCCG TGATGGGCGG GCTGATCGCG
GCGACGCTTT TGACCCTGTT TTTCCTGCCC GCCCTCTATG CCGCATGGTT CCGCGTGAAG
CGGGCGTAG
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| Protein sequence | MSPAPRFVPG AGNLSRWAIE HPALVRFFVV LILLLGVRSY FQLGQAEDPP FTFKTMLIQA
EWPGASAQEV SEQLTERIEK KLQEMPELDY VQSYAKPGET ALFVNLKETV RGRDVADAWY
QVRKKIGDLA PQLPAGVRGT FFNDEFGDTF GSIYAFTGDG FSRAELRRAA EDAQREVRRL
PNVGKVELFG VVPEKIYVDI PTQKLATLGL TLEQISTAIE AQNGIVANGR VENDRLSIPL
RLSGSYSDVE RVRETVLRAG AQSLRLGDIA EVKRRYEDPP ANEIRSQGEP AVLLGVSLAD
GGDVLALGRD VGAAIAALQK NLPLGLEIRK IHDQPQIVES AVGLFMKAFA EAVAIVLAVT
FLALKWRAGL VVALSIPVVL AITFTAMWFF NIDLHRISTG ALIIALGLLV DDAIIAVEMM
AHKLEAGWSR FEAATYAFQS TAFPMLTGTL LTATAFLPIA LAKSVVGEYT FAIFAVTTIA
LLSSWLVAVV VTPYFGHALL KPTHHVEDEA DAYRTPFYRR FRAAVGWCVT RRWTVIGLTL
VALVVGVAAM QRVEKQFFPA SDRLEILVEM WLPEGASYDA THAAAVRLET LLRSDKDVAH
VLNYIGQGAP RFVLGLDQRL ANRNFAQLVV IAQDVEARER VITRIRGLFE SDFPNVRGRA
VRFEYGPPSG YPVQYRLSGS DIPRLKAEAE KLRRILVAQP QTTAVNLDWN EQALAVKVEL
DQDKLKALGL SSNAVGRLVA LQLSGFVATQ FREDDLLIDV VLRAPRAEHR DVDALRAIPV
GRFDGRSVTL GQVATFEPGF EDGVIWRRDR LPTISVRGDP IGTVQPATII DSIAPQVAAF
KAQLPPGFRL EVGGPVESSA KANAAIGASW PLIVITTLTL LMLQLGSFSR SLLVVLTAPL
GLIGVAIALL VSGRPMGFVA LLGIISLAGM IMRNSVILVD QIRQDLARGL SQWDAIVEST
VRRMRPISLT AAAAVLAMIP LSRSIFWGPM AVAVMGGLIA ATLLTLFFLP ALYAAWFRVK
RA
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