| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2504 |
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| Symbol | |
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| ID | 3671823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 2576774 |
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| End bp | 2577571 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637711210 |
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| Product | shikimate dehydrogenase |
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| Protein accession | YP_316262 |
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| Protein GI | 74318522 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC GCTACGCCGT ATTCGGGCAC CCGATCGCCC ACTCCAAGTC GCCTCAGATC
CACGCCGCGT TCGCCCGCCA GACCGGGCAG GACATGTGCT ACGAGGCGAT CCTCGCGCCG
CTCGAGGGTT TCACCGAAAG CATTGCGCGG TTCGCCGCCC AAGGCGGACG CGGTGCCAAT
GTCACGGTCC CGTTCAAGGA GGAGGCCTTC CGTCTCGCCG ATCGCCTGAC GCCGCGCGCC
GAGCGCGCCG GCGCCGTCAA CACGCTCATG TTCGACGCCG ACGGCATACT CGGCGACAAC
ACCGACGGCA CAGGGCTCGT CGCCGACCTG ACGGGTAATC TCAAGCGCCC CCTCGCCACG
AGGCGAATCC TGCTCGTCGG CGCCGGCGGG GCCGCGCGCG GCGTGATCGC GCCGTTGCTC
GAGCAGGCGC CCGCCGAGCT CGTGATCGCC AACCGTACGG TCAGCCGCGC GGAGCAACTT
GCCGAACTGT TCGACGGCCG GCTTCGGGCC TGTGGCTTCG ACGCGCTCGA CACGCCGTTC
GACGTCGTCA TCAACGCCAC CGCAGCGAGC CTCGCCGGCG AGCTGCCGCC CCTGCCCCCG
CAGGTCTTCG GCACCGGCGC GCTCGCCTAC GACATGATGT ACGGCCGCGA CACGCCCTTT
CTCGCGTTTG CCAGAGCGCA CGGCGCGGAC ACCGCCGACG GCCTCGGCAT GCTCGTCGAA
CAGGCGGCGG AAGCCTTCCA CCTCTGGCGC GGCGTGCGCC CTGACACGGC ACCGGTCATC
GCCGCCCTGC GCGCGTGA
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| Protein sequence | MTDRYAVFGH PIAHSKSPQI HAAFARQTGQ DMCYEAILAP LEGFTESIAR FAAQGGRGAN
VTVPFKEEAF RLADRLTPRA ERAGAVNTLM FDADGILGDN TDGTGLVADL TGNLKRPLAT
RRILLVGAGG AARGVIAPLL EQAPAELVIA NRTVSRAEQL AELFDGRLRA CGFDALDTPF
DVVINATAAS LAGELPPLPP QVFGTGALAY DMMYGRDTPF LAFARAHGAD TADGLGMLVE
QAAEAFHLWR GVRPDTAPVI AALRA
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