| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2469 |
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| Symbol | |
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| ID | 3671788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 2544158 |
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| End bp | 2545867 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637711175 |
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| Product | putative efflux pump/antiporter |
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| Protein accession | YP_316227 |
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| Protein GI | 74318487 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4651] Kef-type K+ transport system, predicted NAD-binding component |
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| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0878577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGGCA CGGATCTGAT CACCACCATC GCCGCGGCTC TCGGGATGGC GCTCGTATTC
GGCTTCCTCG CGGTACGCGT CAAGCTGCCG GCCTTGGCCG GCTATCTGCT CGCGGGCATC
GTCATCGGCC CCTTCACCCC CGGTTTCGTC GCCGACACGG CGCTCGCGAG CGAACTCGCC
GAAATCGGCG TGATCCTGCT GATGTTCGGC GTGGGGCTGC ATTTCTCGCT CGATGACCTG
CTGTCGGTGA AGAAGATCGC GCTCCCCGGG GCGATCGTGC AGATCGCCGC GGCCACCGCC
ATGGGCGCGG CGCTGGCGGC CTGGTGGGGC TGGAATCTGA CGGCGGGGAT CGTGTTCGGG
CTCTCGCTCT CGACCGCGAG CACCGTCGTC CTGCTCAAGG CGCTCGAAAG CCGCGGCATA
CTCGCGACGC CAAACGGGCG CATCGCGGTC GGCTGGCTCG TGGTCGAAGA CCTGGCCATG
GTGCTCGTCC TGGTGCTGTT GCCGCCCGTG GCCGAAATCG CCAGCGGAAA CAGCGCCGCG
AGCCCCGGCT CGCTGGCAGG GACACTCGCG CTCACCGTGG GCAAGGTGGC CATGTTCATC
GCGCTGATGC TCGTCGTCGG CCGACGTTTC TTCCCCTGGC TGCTGTGGCA GGTCGCGCGC
ACCGGCTCAC GCGAATTGTT CACGCTCTGC GTCGTCGGCG CCGCGCTCGG CATCGCCTAC
GGCTCCTCCG CGCTGTTCGG GGTCTCGTTC GCGCTCGGTG CCTTTTTTGC CGGGATGGTG
CTGCGCGAGT CGGCACTGAG CTACCGCGCC GCGGAGGAGT CGCTGCCCTT GCGCGACGCC
TTCGCCGTCC TGTTCTTCGT TTCGGTCGGC ATGCTCTTCG ATCCACGCGT GCTGGTCGAA
CAGCCGCTGC AGGTCCTGGC AGTCGTCGCA ATCATCGTGT TCGGCAAATC GCTCGCCGCG
TTCCTGCTCG TGCTCGCCTT CCGCTATCCG CTCAATACCG CGTTGACCGT TTCGGCGAGC
CTCGCGCAGA TCGGCGAATT CGCCTTCATC CTGGTCGGCC TCGGCGTCGC GCTCGGCATG
TTGCCGGTGC AGGGCCAGAG CCTGATTCTC GCCGGTGCAT TGATCTCGAT CGCGCTCAAT
CCGCTCGTCT TCCGCGCCGT CGAGCCGGTG CAGGCGTGGC TGCGCCGTCA CTCTGCGCGG
GCGCGCCGAC TCGAGTCACC CGATGACCCT TTGGCCGAGC TTCCCGCAGA CGTCGCCGCG
GATACGCTGA CCGATCACAT CGTGCTGGCG GGATACGGGC GCGTCGGCCG GCGCATCGCC
GACGCGCTCG ACGCCGAGGG GCTGCCCTAC ATCGTCGCCG AACAGCAGCG CGAGGCGGTC
GAGAAGCTGC GCGGCCGTGG GCACAAGGCC GTCGTGGGCG ACGCCTCGGA CCCCGGCGTG
TTGATCCAGG CGCACGTCGC CCGGGCCCGG CTGCTCGTCA TCGCCACGCC GGACAGCTTT
CGCGCGCGCA AGATGATCGA GATCGCGCGC ACCCTCAATC CTGCCATCCG CGTCGTGGTC
CGCAGCCACA GCGTCGACGA AGCGGCGTTG CTGCGCCGCG AGCACGCGGC CGACGTGCTC
GTCGGCGAAG AGGAGCTTGC GCAGAGCATG GTCCTCCGCG TGCGCGCGCA TGCGCGGCAG
GCGGGGGCCG ACGTGTTCGC ACAGCCATGA
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| Protein sequence | MHGTDLITTI AAALGMALVF GFLAVRVKLP ALAGYLLAGI VIGPFTPGFV ADTALASELA
EIGVILLMFG VGLHFSLDDL LSVKKIALPG AIVQIAAATA MGAALAAWWG WNLTAGIVFG
LSLSTASTVV LLKALESRGI LATPNGRIAV GWLVVEDLAM VLVLVLLPPV AEIASGNSAA
SPGSLAGTLA LTVGKVAMFI ALMLVVGRRF FPWLLWQVAR TGSRELFTLC VVGAALGIAY
GSSALFGVSF ALGAFFAGMV LRESALSYRA AEESLPLRDA FAVLFFVSVG MLFDPRVLVE
QPLQVLAVVA IIVFGKSLAA FLLVLAFRYP LNTALTVSAS LAQIGEFAFI LVGLGVALGM
LPVQGQSLIL AGALISIALN PLVFRAVEPV QAWLRRHSAR ARRLESPDDP LAELPADVAA
DTLTDHIVLA GYGRVGRRIA DALDAEGLPY IVAEQQREAV EKLRGRGHKA VVGDASDPGV
LIQAHVARAR LLVIATPDSF RARKMIEIAR TLNPAIRVVV RSHSVDEAAL LRREHAADVL
VGEEELAQSM VLRVRAHARQ AGADVFAQP
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