Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2456 |
Symbol | |
ID | 3671775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 2527115 |
End bp | 2528167 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637711162 |
Product | dihydrouridine synthase |
Protein accession | YP_316214 |
Protein GI | 74318474 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATCG GTTCCCACCT CCTGAAAAAC CGCCTGATCG TCGCCCCGAT GGCCGGCGTG ACCGATCGGC CGTTTCGCCA GCTGTGCAAG AAGCTCGGCG CGGGCATGGC GGTCTCGGAA ATGGTGACGT CGAACTCGCT GCTGTACGGC TCGGCCAAGA CGGCGCGGCG CGCCAACCAC GAAGGCGAGG TCGACCCGAT CAGCGTCCAG ATCGCCGGCG CCGATCCGCG GATGATGGCC GAGGCGGCGC GCCACAACGC CGACCGCGGC GCCCAGATCA TCGACATCAA CATGGGGTGC CCGGCGAAGA AGGTCTGCAA CGTGATGGCC GGCTCGGCGC TGCTGCAGGA CGAGGCGCTC GTCGGACGCA TCCTCGACGC CGTCGTCGCG GCCGTGCCCG AGCTGCCGGT GACGCTGAAG ATCCGCACCG GCTGGGATCG CGAACACCGC AACGCACTCG CCATCCTCGG GATCGCCGAG AACGCCGGCG TAAAGGCGCT CGCGATCCAC GGCCGCACAC GCGCCTGCGG CTACTCGGGC GAGGCCGAAT ACGACACGAT CCGCGCGGTG AAGGCCGCGG CGCGGATTCC GGTCATCGCC AACGGTGACA TCACGACCCC GGAAAAAGCG CGCCACGTGC TCGAACACAC GGGCGCCGAC GCGGTCATGA TCGGCCGCGC CGCCCAGGGG CGGCCCTGGA TCTTCCGCGA GATCGAGCAT TACCTGCGCA CCGGCGAACA CCTGCCGCAG CCTGAAGTGG CCGAAATCCA CCGCGTGCTG CTCGATCACC TCCACGACCT CTACGGCTTC TACGGCGAAG TCACCGGGGT GCGCGTCGCG CGCAAGCACA TCTCCTGGTA CACGCGCGGG CTCGTCGGCA GCAGCGCTTT TCGCCACGCC ATGAACCGGC TCGACTCGGT CGCCGAGCAG CTTGCCGTCG TCAACGACTA TTTCGCCCAG GCGGCGCGCG CGGACGTCCG CCTCCGCTAC GAAGCCGGCC AAGACAACAA TAACGCGGAC GACCTGCTGC CGGCCTCACG GCTCGCGGCA TAA
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Protein sequence | MRIGSHLLKN RLIVAPMAGV TDRPFRQLCK KLGAGMAVSE MVTSNSLLYG SAKTARRANH EGEVDPISVQ IAGADPRMMA EAARHNADRG AQIIDINMGC PAKKVCNVMA GSALLQDEAL VGRILDAVVA AVPELPVTLK IRTGWDREHR NALAILGIAE NAGVKALAIH GRTRACGYSG EAEYDTIRAV KAAARIPVIA NGDITTPEKA RHVLEHTGAD AVMIGRAAQG RPWIFREIEH YLRTGEHLPQ PEVAEIHRVL LDHLHDLYGF YGEVTGVRVA RKHISWYTRG LVGSSAFRHA MNRLDSVAEQ LAVVNDYFAQ AARADVRLRY EAGQDNNNAD DLLPASRLAA
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