Gene Tbd_2394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2394 
Symbol 
ID3671439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2466672 
End bp2468213 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content65% 
IMG OID637711100 
Productphosphoglyceromutase 
Protein accessionYP_316152 
Protein GI74318412 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0696] Phosphoglyceromutase 
TIGRFAM ID[TIGR01307] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCC TGCCGGTTCT CCTCATCATC CTCGACGGGT TTGGCTGCCG CGACGAACGC 
GCGAACAATG CGATTGCACA GGCCAACAAG CCGAATTGGG ACCGGCTCTG GAAGCACCAT
CCGCACACCC TCATCCACGC CTCCGAGTCG GAGGTCGGGC TGCCGAAGGG GCAGATGGGC
AATTCCGAGG TCGGCCATCT CAATATCGGG GCGGGGCGGG TCGTGTACCA GGAATTCACC
CGCATCGACC GCGCGATCGA GTCGGGTTAC TTCTACACCA ACCCGGCCTT GCTGAACGCC
GTGCATCTGG CGCGCGACAA CGGCAAGACC CTGCACGTCC TGGGCCTGCT GTCGGACGGC
GGCGTGCACA GCCACGAGTT GCATTTCCAT GCCCTGCTCG ATCTGGCCGC GCGCGAGGGG
CTCAGCAAGG TCTGCCTGCA CGTGTTTCTC GATGGCCGCG ACACGCCGCC CAAGAGCGCC
GAACTCTACC TGCGCCGCCT GACCGACAAG ATAGCGCAGG CCGGGGTCGG TCATGTTGCG
TCGATGATCG GCCGCTACTT TGCGATGGAC CGCGATCGTC GTTGGCAACG TGTGAAATCG
GCCTACGACC TCCTGACTCA AGGCGCGGCC GAGTTCAGCG CCGGGTCTGC ACAGGCCGGA
CTCGAAGCGG CCTACGCGCG CGGCGAGACC GACGAGTTCG TCAAGGCGAC CGCGATCGTG
CCGGCCGACG GCAGGCCGGT GACGATGGAG GACGGCGATT CGGTCATTTT CCTGAATTTC
CGCTCCGACC GCGCACGCCA ATTGTCGCGA CCTTTCATCG AGCCCGACTT CAGCGAGTTC
GAGCGTGAAC GCACGCCGCG TCTGGCGACC TACTGCACGC TGACCGGCTA CAGCGACGAT
TTCGACGTGT CGGTCGCGTT CCCTCCCGAA CGCATCAAGA ACGGGCTCGG CGAATACGTC
GCCAACCTCG GGCTGCGCCA GTTGCGCATC GCCGAGACCG AGAAGTATCC GCACGTGACC
TTCTTCTTCA ACGGTGGCGA GGAAGTGTCG TTCCCGGGCG AGGACCGCAT CCTCGTGTCG
TCGCCGGACG TCGCGACCTA TGATCTCAAG CCTGAGATGA GTGCCTTCGA GGTAACGGAA
AAGCTGCTCG CCGCGATCGG CAGCAAGCAG TACGACCTCA TCGTCTGCAA CTACGCCAAT
CCCGACATGG TCGGCCACAC CGGCAATCTC GAGGCGGCGA TCAAGGCGAT CGAGACCGTC
GACACCTGCC TCGGCCGCGT CGTCGAGGCG CAGCTCGCCC GCGGCGGCGA GGTCCTGATC
ACGGCTGACC ACGGCAACGC CGAACTCATG CTCGACGCCG AAACCGGCCA GGCGCACACC
GCACACACCA TGAATCTCGT GCCCGTGATC TTCGTCGGCC GTCGCCACGC GAGTCTGGCC
GAGACCGGGG CTCTGGAGGA CGTCAGCCCG ACGCTGCTCA GAATGATGGG TCTGCCGCAG
CCACCCGAAA TGAGCGGGGA ATCGCTGCTT GCGTTCGAGT AA
 
Protein sequence
MKALPVLLII LDGFGCRDER ANNAIAQANK PNWDRLWKHH PHTLIHASES EVGLPKGQMG 
NSEVGHLNIG AGRVVYQEFT RIDRAIESGY FYTNPALLNA VHLARDNGKT LHVLGLLSDG
GVHSHELHFH ALLDLAAREG LSKVCLHVFL DGRDTPPKSA ELYLRRLTDK IAQAGVGHVA
SMIGRYFAMD RDRRWQRVKS AYDLLTQGAA EFSAGSAQAG LEAAYARGET DEFVKATAIV
PADGRPVTME DGDSVIFLNF RSDRARQLSR PFIEPDFSEF ERERTPRLAT YCTLTGYSDD
FDVSVAFPPE RIKNGLGEYV ANLGLRQLRI AETEKYPHVT FFFNGGEEVS FPGEDRILVS
SPDVATYDLK PEMSAFEVTE KLLAAIGSKQ YDLIVCNYAN PDMVGHTGNL EAAIKAIETV
DTCLGRVVEA QLARGGEVLI TADHGNAELM LDAETGQAHT AHTMNLVPVI FVGRRHASLA
ETGALEDVSP TLLRMMGLPQ PPEMSGESLL AFE