Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2335 |
Symbol | |
ID | 3673463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 2409044 |
End bp | 2409757 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637711040 |
Product | putative nucleotidyl transferase |
Protein accession | YP_316093 |
Protein GI | 74318353 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.512409 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCGTTG CGCCCTCGGC GATGATCCTT GCGGCGGGTC GCGGCGAACG CATGCGTCCC CTGACCGACC ACACGCCCAA GCCGCTTCTG CACGTGGGCG GAAAACCGCT GATCGTCTGG CACATCGAAC GGCTGCGCGC CGCCGGCTTC CGCCACGTCG TCATCAACCA CGCGCATCTC GGCGAACAGA TTGAGGCGGC GCTCGGCGAT GGCGCGGCCT TGGGCGTTGC AATCGATTAT TCGCGCGAAG CGAGCGCGCT CGAAACGGCG GGCGGCATCG CGACCGCGTT GCCCTTGATC CGTGGCGAGG CCTTTGCCGT CGTCAACGGC GACATCTATA CCGACTACGA CTTCGGGCGC CTGGCCGAGC CGCTCACCTG GCTCGCCGCA GGCGGCGACC AGGCCCATCT CGTCATGGTC GACAACCCGC CGCAGCACCC CAACGGCGAT TTCGTGCTCG AAGACGGCCG GGTGAAAAGC GGCGAGCAGG CCGCCGAGTC ATCTCGCCTG ACCTTTTCCG GCATCGGCGT CTACCGGCGC GCGCTTTTCG CCGACCTACG CGCGGGCGAG AAGGCGCCGC TCGCGCCGCT GCTGCGGCAG GCGATGGACG CGGCCCGGGT CAGCGGCGAA CATTACAGCG GGCGCTGGAC CGACGTCGGC ACGCCGGCGC GTCTTGCCGC GCTCGACGAG GAACTGAGAC GACATGCAGC CTGA
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Protein sequence | MSVAPSAMIL AAGRGERMRP LTDHTPKPLL HVGGKPLIVW HIERLRAAGF RHVVINHAHL GEQIEAALGD GAALGVAIDY SREASALETA GGIATALPLI RGEAFAVVNG DIYTDYDFGR LAEPLTWLAA GGDQAHLVMV DNPPQHPNGD FVLEDGRVKS GEQAAESSRL TFSGIGVYRR ALFADLRAGE KAPLAPLLRQ AMDAARVSGE HYSGRWTDVG TPARLAALDE ELRRHAA
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