Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2258 |
Symbol | |
ID | 3672319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 2332363 |
End bp | 2333529 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637710963 |
Product | putative glucose-fructose oxidoreductase protein |
Protein accession | YP_316016 |
Protein GI | 74318276 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00555466 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGTA CAAGCAAGCG GGCGGCGACT GCCCCCGGGG TGAAGGCCGC GCCGCGACGC GGCAGAAAGA TCCGCTACGC CGTCGTCGGC CTCGGCTACA TCGCGCAGAT CGCCGTGCTG CCGGCTTTTG CCCAGGCCGC GAAGAACGCC GAACTCGCGG CGCTGGTGTC GGATGACCCG GTCAAGCTCA AGAAGCTGGC GAAGCAATAC GGCGTCCCGC GCGTCGCGAG CTACGCGGAA TACGACGCGC TGCTGGCGAG CGGCGAGATC GACGCCGTCT ACATCGCGCT GCCCAACCAC CTGCACCTCG ATTACACATT GCGCGCGGCG CGCGCCGGGG TGCACGTGCT GTGCGAAAAA CCGATGGCGG TGACCGAGGC CGAATGCCGG CGCATGACGC GTGAATGCGA AAAGCGCGGG GTCAAGCTGA TGATCGCCTA CCGTCTGCAC TTCGAGAAGG CGAATCTCGC GGCGGCCGAA CTCGTCAATT CGGGCAAGCT CGGCGACGCG CGGATTTTCA ATTCGGTGTT CACGATGCAG GTCAACGATC CCGACAACAT CCGCCTGCAG GACGAAACCG GCGGCGGGGT GCTCTACGAC ATCGGCGTCT ACTGCATCAA CGCTGCGCGT TACCTGTTTC GCGACGAGCC GACCGAGGTC TTCGCGGCGA CGGCGCGCAA GCCGGACGCG CGCTTCGACG AGGTCGAGGA GATGGCGAGC GCGCTCATGC GCTTTCCGGG CGACCGCCTC GCGAGCTTCA CCGCGAGCTT CGGCGCGGCC CGCGGCTCGT CCTACGAGGT CGTCGGCACC AAGGGTTCAT TGCGCGTCGC GCCCGCCTAC GGTTACGCCG AGGATCTCAA ACACGTCGTG ACGATCGGCG GCAAGACGCG GGAGCGCGTG TTTCCGCGCG GCGACCAGTT CGCCCCGCAA CTGCTCTATT TCTCCGATTG CATCCTGCAG GACCGGACGC CCGAGCCTTC GGGCGAGGAG GGCCGGCTCG ACGTGCGCAT TATCGAGGCG CTCTACCGCT CGGCCAAAAT CGGAAAGCTC GTCCGCCTCG CGCCCGCCGG CAAGGTGGAG CGGCCCGACA GCGATCAGGA ACGCTCGCGG CCGCCGATCG ACAAACCGCG GCTCGTGCGC GCCCGCGCGC CATCTGACAA GGGCTAG
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Protein sequence | MARTSKRAAT APGVKAAPRR GRKIRYAVVG LGYIAQIAVL PAFAQAAKNA ELAALVSDDP VKLKKLAKQY GVPRVASYAE YDALLASGEI DAVYIALPNH LHLDYTLRAA RAGVHVLCEK PMAVTEAECR RMTRECEKRG VKLMIAYRLH FEKANLAAAE LVNSGKLGDA RIFNSVFTMQ VNDPDNIRLQ DETGGGVLYD IGVYCINAAR YLFRDEPTEV FAATARKPDA RFDEVEEMAS ALMRFPGDRL ASFTASFGAA RGSSYEVVGT KGSLRVAPAY GYAEDLKHVV TIGGKTRERV FPRGDQFAPQ LLYFSDCILQ DRTPEPSGEE GRLDVRIIEA LYRSAKIGKL VRLAPAGKVE RPDSDQERSR PPIDKPRLVR ARAPSDKG
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