Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2246 |
Symbol | |
ID | 3672307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 2320776 |
End bp | 2321675 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637710951 |
Product | putative Ku-like DNA-end-binding protein |
Protein accession | YP_316004 |
Protein GI | 74318264 |
COG category | [S] Function unknown |
COG ID | [COG1273] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02772] Ku protein, prokaryotic |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACAA GCCCACGAAC GCTCTGGAAA GGCGCCATCA GTTTCGGCCT GGTACACATT CCGATCGCCC TCTACACCGC GACCACCGAG CAGGGACTCG ACTTCGACTG GCTCGACAAG CGCAGCATGG ATCCGGTCGG CTACAAGCGC GTCAACAAGC GCACCGGCAA GGAGATTTCG CGCGAGAACA TCGTCAAGGG CATCGAGTAC GAGGACGGCC GCTACGTCGT GCTGTCGCCC GAAGAGATTG CCGCAGCCTA CCCGAAGACG ACGCAGACGA TAGAGATCGA GACCTTCGCG CCGGCCGCGG ACATCCCCTT CATCTACCTC GATCGACCCT ACTACGTCGC GCCGATCAAC AAGGGCGCGA AGGTCTACGC CCTGCTGCGC GAGATCCTGC GCAAGACCGG CAAGGTGGGC ATCGCGCGCG TCGTCATCCA GAGCAAGCAG CATCTCGCGG CGCTGATGCC CTATGGCCCG GTCATGGTCC TCAACCTGCT GCGCTGGGGC GACAAGATAC GCGGCTACGA CGCCCTCGAT CTGCCGGCGG AAGGCATCAA GGCGGCCGGC GTGAGCGACA AGGAAATGCG CATCGGTGAG CAGCTCGTCG AGGACATGAG CGCCCCCTGG GATCCGGCCG CGACCCGCGA CTCGTTCAAG GAGCAGATCC TGCAGCTCGT CGAGGCGAAG GCACAAGCCG GCAAACTCGA ATCGGTCGCG CCGATCGAAG CGCGCGAGCA CGAACCGGCC GGCGCCACGA TCTACGACCT CACCGAACTG CTGCAGCGCA GCCTGAGCAA GGCGAAGCAG GACAAACAGC CTTCGGCGCG CGCCACGCCC AAGGCCCGCG CGGGTGCGAA GACGCCGACC AAGTCGGGCG GCAAGCGCAA GGCCGCGTAA
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Protein sequence | MATSPRTLWK GAISFGLVHI PIALYTATTE QGLDFDWLDK RSMDPVGYKR VNKRTGKEIS RENIVKGIEY EDGRYVVLSP EEIAAAYPKT TQTIEIETFA PAADIPFIYL DRPYYVAPIN KGAKVYALLR EILRKTGKVG IARVVIQSKQ HLAALMPYGP VMVLNLLRWG DKIRGYDALD LPAEGIKAAG VSDKEMRIGE QLVEDMSAPW DPAATRDSFK EQILQLVEAK AQAGKLESVA PIEAREHEPA GATIYDLTEL LQRSLSKAKQ DKQPSARATP KARAGAKTPT KSGGKRKAA
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