| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2222 |
|---|
| Symbol | |
|---|
| ID | 3671981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 2301966 |
|---|
| End bp | 2302754 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637710927 |
|---|
| Product | indole-3-glycerol phosphate synthase |
|---|
| Protein accession | YP_315980 |
|---|
| Protein GI | 74318240 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.688049 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGACA TCCTCGAAAA AATCCTCGCG ACCAAACGCG CCGAGGTCGC GGCCGGCCTC
GCCCGGGTGC CGCTCGCCGA AATGCGCGCG CGTGCCGAGG CGGCCGCGCC GGCACGCGAT
TTCGTCGGCG CGCTGCGGGC AAAGCGCGAT GCCGGCCGGC CGGCCGTGAT CGCAGAGATC
AAGAAGGCAA GTCCGTCCAA GGGCGTGATC CGGGCCGACT TCCGGCCCGC GGAAATCGCC
GCCAGTTATG AAAAGGGCGG CGCGGCATGT CTGTCCATAC TGACCGACGC GGAATATTTC
CAGGGCAGCG CGGACTACCT CAAGGCCGCA CGCGCGGCCT GTACGCTTCC GGTCCTGCGC
AAGGATTTCA TGATCGACGC CTACCAGGTC TACGAGGCGC GCGCGATGGG CGCCGACTGC
ATCCTGCTGA TCGTCGCCGC GCTCGAGTTG CCGGCGATGC AGGCGCTCGA AGCGCTGGCG
AATGAATTGG GGATGGCGGT TCTCGTGGAG TCGCACGACG CCGCCGAACT CGACGCCGCG
CTGACGCTGC GCACGCCGCT GCAGGGCATC AACAACCGCA ACCTGCGCAC CTTCGAGGTC
AGCCTCGATA CCACGCTTTC GCTGCTGCCG AAGATAGGCC CCGAGCGCAT CGTCGTCACC
GAGTCCGGCA TCCTCGCGCC GGCCGACGTG GATACGATGC GCAGCCGCGG CGTCAATACC
TTTCTGGTCG GCGAGGCCTT CATGCGTGCG GCCGACCCGG GCGCCGAGCT TGCCAGGCTG
TTTGCCTGA
|
|---|
| Protein sequence | MSDILEKILA TKRAEVAAGL ARVPLAEMRA RAEAAAPARD FVGALRAKRD AGRPAVIAEI
KKASPSKGVI RADFRPAEIA ASYEKGGAAC LSILTDAEYF QGSADYLKAA RAACTLPVLR
KDFMIDAYQV YEARAMGADC ILLIVAALEL PAMQALEALA NELGMAVLVE SHDAAELDAA
LTLRTPLQGI NNRNLRTFEV SLDTTLSLLP KIGPERIVVT ESGILAPADV DTMRSRGVNT
FLVGEAFMRA ADPGAELARL FA
|
|---|
| |