Gene Tbd_2190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2190 
Symbol 
ID3671971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand+ 
Start bp2272077 
End bp2273162 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content68% 
IMG OID637710894 
Productbifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein 
Protein accessionYP_315948 
Protein GI74318208 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.667147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones1 
Fosmid unclonability p-value0.00000623839 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCTCG CCTCCACCCT CGAAATCATC GAAGAACTGA AGGCCGGCCG CATGGTCGTG 
CTCGTCGACG AGGAGGACAG GGAAAACGAG GGCGACCTCG TGATGGCCGC CGAGCATGTC 
ACGCCCGACG CGATCAACTT CATGGCCAAA TACGGCCGCG GCCTCATCTG CCTCACGCTG 
ACCGACGCGC GCTGCCGCCA GCTCGGCCTG AAGCAGATGG TCTCCGACAA CCAGACGCCG 
CACGGCACCG CGTTCACGAT CTCGATCGAA GCGGCCGAGG GGGTGACCAC GGGCATCTCG 
GCGGCCGACC GCGCGGTCAC GATCCGCGCC GCGGTCACGA AGGACGCGAA GCCCTCCGAC 
ATCATCCAGC CCGGCCACAT CTTCCCGCTG CGCGCCCAGC CCGGCGGCGT GCTCGTGCGC 
GCCGGCCACA CCGAGGCCGG CTGCGACCTC GCCGGGCTCG CGGGCCTCGA GCCGGCGTCG 
GTCATCTGCG AAATCCTCAA GGACGACGGC AGCATGGCGC GCCTGCCCGA CCTCGTTCCG 
TTCGCGCAGG AACACGGCCT CAAGATCGGC GCGATCGCCG ACCTGATCCA TTACCGCAAC 
CAGACCGAGA GCCTCGTCGA GCGCGCGGCC GACCGCCTGA TCCAGACGAT CTACGGCGCC 
TTCCGCCTGA TCGCGTATCG CGACAAGTGC GCCAAGGAAA CGCACATCGC GCTGGTCAAG 
GGCGAGATCC ACGCCGACCG CGAAACCCTC GTGCGCGTGC ACGAGCCCTT GAGCGTGATG 
GATTTTCTCG ACGTGACGGG CGGTGGCCAT TCGTGGCCGA TCATGGGCGC GATGGAGCGC 
ATCGCCGAGT CGCAGAGCGG CGTGCTGGTC TTGCTGCACC GTCCCGAAAC CGCCGACGCG 
CTGCTCGGCC GCATCAATCC CGCGCCCGCC GCGAGCCACA AATACGACCT GCGCGACTAC 
GGCATCGGCG CACAGATCCT GCGCGACCTC GGCGTCGGCA AGATGAAGCT GCTCGCCAGC 
CCGCGCAAGA TGCCGGCGAT GGACGGCTTC GGCCTGGAAG TCACCGGCTA TTCTGAAAAA 
GCATAA
 
Protein sequence
MSLASTLEII EELKAGRMVV LVDEEDRENE GDLVMAAEHV TPDAINFMAK YGRGLICLTL 
TDARCRQLGL KQMVSDNQTP HGTAFTISIE AAEGVTTGIS AADRAVTIRA AVTKDAKPSD 
IIQPGHIFPL RAQPGGVLVR AGHTEAGCDL AGLAGLEPAS VICEILKDDG SMARLPDLVP 
FAQEHGLKIG AIADLIHYRN QTESLVERAA DRLIQTIYGA FRLIAYRDKC AKETHIALVK 
GEIHADRETL VRVHEPLSVM DFLDVTGGGH SWPIMGAMER IAESQSGVLV LLHRPETADA 
LLGRINPAPA ASHKYDLRDY GIGAQILRDL GVGKMKLLAS PRKMPAMDGF GLEVTGYSEK 
A