Gene Tbd_2186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2186 
Symbol 
ID3671967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2268158 
End bp2269159 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content66% 
IMG OID637710890 
Productputative protease 
Protein accessionYP_315944 
Protein GI74318204 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0826] Collagenase and related proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000352606 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCCGCTTG ATCTCGTCTG CCCGGCGGGC AGTCTCGTTT CGCTCAAGGC GGCGGTCGAC 
AATGGCGCCG ACGCCGTCTA TATGGGATTT CGCGACAACA CCAACGCGCG CGCCTTCCCC
GGGCTCAATT TCGACGAGGC GCAGGCCGCG GAGGGACTGC GCTACGCGCG CGACCGCGGG
CGCAAGGTTC TGCTCGCGCT CAACACCTAC CCGCAGAGCG ACACCTGGAC GCGCTGGACG
GGTGCCGTGG ACCGCGCGGC GAAGCTCGGG ATGGACGCGA TCATCCTCGC CGACCCCGGG
CTCATGCGCT ACGCGGTCAA ACACCATCCG CAGCTGCGGC TTCACCTCTC GGTGCAGGGT
TCGGCGACGA GCTACGAAGC GGTCAATTTC TACCGCGAGC ACTTCGGCGT CCAGCGCGCC
GTGTTGCCGC GCGTGCTCTC GCTTCCGCAG GTCGAAAACG TCGTCATGCA CACCGACGTC
GAAATCGAGT TGTTCGGCTT CGGCGGCCTG TGCGTCATGG TCGAGGGGCG CTGTCTGCTG
TCGTCGTATT GCACGGGTGA ATCGCCGAAT TCGGCGGGGG TGTGCTCGCC GGCGAAGGCC
GTGCAGTGGA AGGACACGCC GACGGGGCTG GAGTCGCGGC TGAACGGCGT GCTGCTCGAC
CGTTACGGGA AGGATGAAAA AGCCGGCTAT CCGACGCTGT GCAAGGGCCG CTTCGAAGTC
GGCGGCGAGA CCTATTACGC GATCGAGGAG CCGACGAGTC TGAACACCCT CGATCTGTTG
CCCGAGATGC TGAAGATGGG GATCGCGGCG ATCAAGATCG AAGGTCGCCA GCGCAGCCCG
GCCTATGTCG CGCAGGTCAC CAAAGTGTGG CGCGCGGCGA TCGACGCGGT GAAGAAGGAT
GCCGTCGATT TCAAACCGAC GCCGGCCTGG CAGGCCGAAC TCAACAAGCT GTCGGAAGGG
CAGAGCCACA CGCTCGGCGC CTACCACCGT CCCTGGAAGT GA
 
Protein sequence
MPLDLVCPAG SLVSLKAAVD NGADAVYMGF RDNTNARAFP GLNFDEAQAA EGLRYARDRG 
RKVLLALNTY PQSDTWTRWT GAVDRAAKLG MDAIILADPG LMRYAVKHHP QLRLHLSVQG
SATSYEAVNF YREHFGVQRA VLPRVLSLPQ VENVVMHTDV EIELFGFGGL CVMVEGRCLL
SSYCTGESPN SAGVCSPAKA VQWKDTPTGL ESRLNGVLLD RYGKDEKAGY PTLCKGRFEV
GGETYYAIEE PTSLNTLDLL PEMLKMGIAA IKIEGRQRSP AYVAQVTKVW RAAIDAVKKD
AVDFKPTPAW QAELNKLSEG QSHTLGAYHR PWK