Gene Tbd_2157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2157 
Symbol 
ID3671938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2243263 
End bp2243778 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content67% 
IMG OID637710861 
Producthypothetical protein 
Protein accessionYP_315915 
Protein GI74318175 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.580825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.120798 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACCTC TCTCCCTCCT CCCGGCAAAA GAAAAAAAGC CCATGAAGAC CGTAACACCG 
ACGATACTCG CGAGCCTGAT CGGCGCGCTC GTCCTCGCAG GATGCGAGGA GGGCGCGAGT
CCATTGCCTG GACTGCAGAG CGACACCGCG CCGGTCGTGC GCGATCTCGA CGCGCAGCAG
GTCGCGCGCG GGCGTGCGGT CTACGCCAAG CATTGCATGG AATGTCACGG CGAAAACGGC
AAGGGCCAGC CCGGCGACTG GCGCATTCGC GACGCGCAAG GCCGCTTCCC GCCGCCGCCG
CTCGACGACA GCGCGCACGC CTGGCATCAC CCGACGGCCG TGCTGCTCGA AGTCATCCGC
GAGGGCAGCC CGGGCGGGCA GGGCAACATG CCGGCGTGGA AGGGAACGCT CAGCGAACAG
GAGATGCAGG ACGTCGTCAC CTACATCAAG TCGCTCTGGT CGGACGAGGT CTACGGCCTG
TGGTGGCAGA TGGAGCAGCA GTCCCTGGAA CCCTGA
 
Protein sequence
MRPLSLLPAK EKKPMKTVTP TILASLIGAL VLAGCEEGAS PLPGLQSDTA PVVRDLDAQQ 
VARGRAVYAK HCMECHGENG KGQPGDWRIR DAQGRFPPPP LDDSAHAWHH PTAVLLEVIR
EGSPGGQGNM PAWKGTLSEQ EMQDVVTYIK SLWSDEVYGL WWQMEQQSLE P