| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2112 |
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| Symbol | |
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| ID | 3672884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 2200570 |
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| End bp | 2202309 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637710815 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_315870 |
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| Protein GI | 74318130 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCCACCA TGCGCACCAC CCAGTTTTTC CTGTCCACCA CCAAGGAAGC CCCGTCCGAA
GCCGAACTCG TCAGCCACAA GCTGATGCTG CGCGCCGGGC TGATCAAGCG TCTGGGCTCC
GGGCTCTACA CCTGGATGCC TCTGGGCCTC CGCGTGCTGC GCCGGGTCGA GGCCGTGGTC
CGCGAGGAGA TGAACCGCGC CGGTGCGATC GAGCTGCTGA TGCCGGCGGT GCAGCCAGCC
GAGCTGTGGC AGGAAACCGG GCGCTGGGCG CAGTTCGGGC CACAGATGCT CAAGATCAAG
GACCGCCACG AACGCGAATT CTGCTTCGGA CCGACCCACG AGGAGGTCAT CACCGACCTT
GCCCGGCGCG AAATCAAGAG CTACCGGCAG TTGCCGCTCA ACTTCTACCA GATCCAGACC
AAGTTCCGCG ACGAGATCCG GCCGCGCTTC GGGGTCATGC GCGCCCGCGA GTTCCTGATG
AAGGACGCCT ACTCCTTCCA CGCGAGCCGC GAGAGTCTGG CCGCCACCTA CCAGGCGATG
TACGACGCCT ACGGGCGGAT CTTCACCCGC CTCGGCCTGC GGTTCCGGGC GGTCGCCGCC
GACACCGGCG CGATAGGCGG CTCGGCCTCG CACGAATTCC ACGTGCTCGC CGATTCCGGC
GAGGATCTGA TCGCCTACTG CCCGGACTCC GATTACGCCG CCAACGTCGA ACTTGCCGAG
GCGCTCGCCC CGGCGGCTGC CCGCGGCGCG CCGCAGGAGG CGATGCGCGA GGTCGAGACG
CCCAAACAGA CGACCTGCGA GGACGTCGCC GCGCTGCTCG GCATCCCGCT CGCCCGCACC
GTGAAGCTCA TCGCCGTGAT GGCGGGGGAG CGGATGGTCG TCGTGCTGCT CCGCGGCGAC
CACATGCTGA ACGAGGTGAA ACTGGCCAAG ATCGAGGGCC TGGCCGATTT CCGCCTCGCG
AACGAAGCCG AAATCCGCGC CGTCTTCGAC TGCCCGCCCG GGTTTCTCGG CCCGGTCGGC
ATCGACCGCT CGACGATCCG GGTCATCGCG GACCGTGCCG TCGCGGTCAT GAGCGACTTC
GTCTGCGGCG CCAACAAGCC GAAATTCCAC CTCGCCGGCG TCAATTTCGG CCGCGACCTG
CAGGAACCCG ATCTCGTGGC CGATATAAGG AATGTCGTCG CCGGCGACCC GAGTCCGGAC
GGCAAAGGCA CGCTCGCGCT GTGCCGCGGC ATCGAAGTCG GCCACGTGTT CCAGCTCGGC
AACAAGTACT CGCAGGCGAT GAACGCAACC TACCTCGACG AGGCGGGAAA GGCGCAGGCG
ATGGAGATGG GCTGCTATGG CATCGGCGTG TCGCGCATCG TGGCCGCCGC GGTCGAGCAG
AACCACGACG GCAAAGGCAT CGTCTGGCCG GCGTCGATGG CGCCCTTCTC GGTCGTCATT
GTCGCCATCG GCTACGGCAA GAGCGCCAGC GTTAAAAATG CCGCGGATAC GCTCTATGCT
GATCTGATGG CGGTCGGGGT CGAAGTCCTG CTCGACGACC GCGACGAACG CCCCGGCGTG
ATGTTCGCCG ACGCCGAACT GGTCGGCATC CCTCACCGCG TCACGCTCGG CGAGCGCGGC
CTGAATGAGG GAGTCGTGGA ATATCAGCCG CGCCGCGCCG CGCCGGAACA GGGCGCCGAT
GCGCGGAAAA TCGCGGTCGC CGAAGCAAAG GCGTTCTTGA TGGGTGTATT GGGAGACTGA
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| Protein sequence | MSTMRTTQFF LSTTKEAPSE AELVSHKLML RAGLIKRLGS GLYTWMPLGL RVLRRVEAVV
REEMNRAGAI ELLMPAVQPA ELWQETGRWA QFGPQMLKIK DRHEREFCFG PTHEEVITDL
ARREIKSYRQ LPLNFYQIQT KFRDEIRPRF GVMRAREFLM KDAYSFHASR ESLAATYQAM
YDAYGRIFTR LGLRFRAVAA DTGAIGGSAS HEFHVLADSG EDLIAYCPDS DYAANVELAE
ALAPAAARGA PQEAMREVET PKQTTCEDVA ALLGIPLART VKLIAVMAGE RMVVVLLRGD
HMLNEVKLAK IEGLADFRLA NEAEIRAVFD CPPGFLGPVG IDRSTIRVIA DRAVAVMSDF
VCGANKPKFH LAGVNFGRDL QEPDLVADIR NVVAGDPSPD GKGTLALCRG IEVGHVFQLG
NKYSQAMNAT YLDEAGKAQA MEMGCYGIGV SRIVAAAVEQ NHDGKGIVWP ASMAPFSVVI
VAIGYGKSAS VKNAADTLYA DLMAVGVEVL LDDRDERPGV MFADAELVGI PHRVTLGERG
LNEGVVEYQP RRAAPEQGAD ARKIAVAEAK AFLMGVLGD
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