Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2018 |
Symbol | |
ID | 3672189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 2107917 |
End bp | 2108945 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637710720 |
Product | electron transport complex, RnfABCDGE type, D subunit |
Protein accession | YP_315776 |
Protein GI | 74318036 |
COG category | [C] Energy production and conversion |
COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTCTC CTTACATCCT CGATCGCACG AGCGTCACCG TCGTCATGGC CTGGGTGCTG GCCGCCCTGC TTCCGGGCAT CGGGGTCTAC GTCTGGCTGT TCGGGCCCGG CATCCTGCTG ACGCTGTCGA TTGCGACCGT CACCGCCGTC GCGGCCGAGG CCGGGATGCT CAAGGCGCGC GGCTACCCGA TCAAGCCTTT CCTCGGCGAT CTCTCGGCGG TCGTCACGGC CTGGCTGCTC GCGCTCTCGC TGCCCTCGCT CGCGCCCTGG TGGCTGATCG TCACCGGGAC CCTGTTCGCG ATCGTCGTCG CCAAGCACCT GTACGGCGGG CTGGGCCAGA ACGTGTTCAA TCCGGCGATG GTCGGCTACG CGGTGCTGAT CGTGTCGTTT CCGGTCCAGA TGACGCAGTG GGCGGGCCCG CTCGAACTGA CCGCGACGCC GCTCGGGATC GGCCAGAGCG CCGCGATCAT TTTCGGCGCG GACGTGCCGA AGAGCCTGCT CGACGCCGTG ACCATGGCGA CGCCGCTCGA CACGCTGCGG ACCGGCCTGC TGCAGCAGCA CACGGTCGAC GAGGTCGTGC GGCAGCCGAT TTTCGGCTAC CTCGGCGGCA CCGGCTTCGA ATGGCTGGCC GCGGCCTTCC TGCTCGGTGG CCTGCTGCTG TGGGCCCTGC GCATCATCAG CTGGCAGGTG CCGCTCGCTT TTCTGGTCGG CGTGTGGCTG ACCGCCGGCT TCCTGCACTT CTTCGACGCC GGCCGCTTCG GCGCGCCCTG GTTCCATGTC TTCGCCCCGT CGGTCATGCT CGGCGCCTTC TTCATCGCGA CCGATCCGGT GTCGGGCGCG ACGACGCCGC GCGGCAAGGT GGTCTTCGGT CTCGGCGCCG GATTCCTGAC CATCGTGATC CGGACCTGGG GCGGCTTCCC CGACGGTGTC GCGTTCGCCA TCCTGCTCAT GAACCTGTGC GTGCCGCTGA TCGATCAGTA CACCCAGCCG CGCGTCTACG GTGAAGTCCG CAAGGAGCCG CGCGCGTGA
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Protein sequence | MPSPYILDRT SVTVVMAWVL AALLPGIGVY VWLFGPGILL TLSIATVTAV AAEAGMLKAR GYPIKPFLGD LSAVVTAWLL ALSLPSLAPW WLIVTGTLFA IVVAKHLYGG LGQNVFNPAM VGYAVLIVSF PVQMTQWAGP LELTATPLGI GQSAAIIFGA DVPKSLLDAV TMATPLDTLR TGLLQQHTVD EVVRQPIFGY LGGTGFEWLA AAFLLGGLLL WALRIISWQV PLAFLVGVWL TAGFLHFFDA GRFGAPWFHV FAPSVMLGAF FIATDPVSGA TTPRGKVVFG LGAGFLTIVI RTWGGFPDGV AFAILLMNLC VPLIDQYTQP RVYGEVRKEP RA
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