Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1986 |
Symbol | |
ID | 3671738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 2076228 |
End bp | 2077763 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637710685 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_315744 |
Protein GI | 74318004 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACC GCTTGTTTAT TTTCGACACG ACCTTGCGCG ACGGGGAGCA GAGCCCGGGC GCCTCCATGA CCAAGGACGA GAAGCTGCGC ATCGCGCGTC AGCTCGAGAA GCTCGGCGTC GACGTCATCG AGGCGGGTTT CGCGGCTGCG AGTCCCGGCG ACGCCGACGC AATCCGTGCG ATCGCCGAGA CGGTCCGCAA TTCCACGGTC TGTTCGCTCG CGCGCGCCAA CGAGCGCGAC ATCCATGCCG CTGGCGGCGC GATCAAGCCG GCAAAGTCCG GGCGCATCCA TACCTTCATC GCGACCAGCC CGATCCACAT GGAAAAGAAG CTGCGCATGC AGCCCGACCA GGTCGTCGAG GCGGCGGTCA AAGCGGTCAA GCTCGCGCGC GAATACACCG ACGACGTCGA ATTCTCGGCC GAAGACGCGG TGCGCTCCGA CATGGATTTC CTCGTGCGGA TCTTCGATGA AGTGATCAAG GCGGGCGCGA AGACGATCAA CGTGCCCGAC ACGGTCGGCT ACTCGATTCC CGCGCTGTGG GGCGAGCGCA TGAAAGCGCT CATCGAGCGC GTGCCGGGGT CCGACAAGGT GATCTGGTCG ACGCACTGCC ACAACGACCT CGGCATGGCG GTCGCCAACT CGCTCGCCGC CGTCATGAAC GGCGCGCGCC AGGTCGAGTG CACGATCAAC GGCCTTGGCG AGCGCGCCGG CAACGCGTCG CTGGAAGAGA TCGTGATGGC GGTGCGCACG CGTCGCGACG TGTTCGGCTG CGACACCCGC ATCGACGCCA CGCAGATCGT CCCGTCGTCG AAACTCGTCT CGACCATCAC CGGCTATCCG GTGCAGCCGA ACAAGGCCAT CGTCGGCGCC AACGCGTTCG CCCACGAGTC GGGCATTCAC CAGGACGGCG TTTTGAAGCA CCGCGAAACC TACGAGATCA TGCGCGCCGA GGACGTCGGC TGGAACGCGA ACCGCCTCAC GCTCGGCAAG CTCTCCGGCC GCAACGCCTT CAAGACCAAG CTCGCCGAGC TCGGCATCGT GCTAGACAGC GAGGAGGCAC TCAACGCCGC GTTCGCGCGC TTCAAGGACC TCGCCGACAA GAAGCGCGAA ATCTTCGACG AGGATCTGCA GGCGCTCGTC TCCGACGAAG GCTACGCGAC CGAGGACGAG CGCTTCAAGC TCCTGTCGAT GAAGGTGTGT TCGGAGACCG GCGAAGTGCC GCGCGCTCAG CTCGTGTTCA CCGACGACGG CGCCGAAAAG CAGGCCAGCG GCGAGGGCTC GGGCCCGGTC GACGCGACCT TCAAGGCGCT CGAATCGGTC GTGCACAGCG GCGCCGATCT CTTGCTCTAT TCGGTCAACA ACATCACCAG CGGCACCGAT GCGCAGGGCG AGGTGACCGT CCGGCTCGCG CAGGATGGCC GCGTGGTCAA CGGACAGGGT GCCGACACCG ACATCGTCGT CGCCTCGGCG AAGGCCTATC TGCATGCGCT CAACAAGCTG CACAGCAAAC GCGAGCGCGC GCATCCCCAG GTGTGA
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Protein sequence | MNDRLFIFDT TLRDGEQSPG ASMTKDEKLR IARQLEKLGV DVIEAGFAAA SPGDADAIRA IAETVRNSTV CSLARANERD IHAAGGAIKP AKSGRIHTFI ATSPIHMEKK LRMQPDQVVE AAVKAVKLAR EYTDDVEFSA EDAVRSDMDF LVRIFDEVIK AGAKTINVPD TVGYSIPALW GERMKALIER VPGSDKVIWS THCHNDLGMA VANSLAAVMN GARQVECTIN GLGERAGNAS LEEIVMAVRT RRDVFGCDTR IDATQIVPSS KLVSTITGYP VQPNKAIVGA NAFAHESGIH QDGVLKHRET YEIMRAEDVG WNANRLTLGK LSGRNAFKTK LAELGIVLDS EEALNAAFAR FKDLADKKRE IFDEDLQALV SDEGYATEDE RFKLLSMKVC SETGEVPRAQ LVFTDDGAEK QASGEGSGPV DATFKALESV VHSGADLLLY SVNNITSGTD AQGEVTVRLA QDGRVVNGQG ADTDIVVASA KAYLHALNKL HSKRERAHPQ V
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