Gene Tbd_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1960 
Symbol 
ID3671712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2054098 
End bp2054688 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content67% 
IMG OID637710659 
Producthypothetical protein 
Protein accessionYP_315718 
Protein GI74317978 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGT GGATATTCGA ACCGGGACAC TCGGGCGCCG AGTTTGCGGT GCGGCACATG 
ATGGTGTCGC ACATGCGCGG CCTCTTCAAG AACGTGCACG GCAGCATCGA CTTCGACCCG
GATGACCCGG CCGGCGCAGC GGCGGTCGAG GCGAGGATCG ACGCCGCGGG GATCTGGAGC
GGGGACGAAG CGCGGGACGC GCATCTGCGT GGACCGAATT TTTTGGACGT CGCGACCTAT
CCGGAGATCG CCTTCCGCAG CACCGAAGTC CGCTGCGTCG GCGAGGCCGA CCTCCGCGTC
GCGGGCGATC TCGTGCTCCG CGGCGTGACC CGTCGCGTCG TGCTCGACTC GCGCTATCTA
GGCCGCTGGC AGTGCCCGTA CTGGGAGGGC GACAAGGACC TGGGGCCGAC GACGCGCATC
GGCTTTCTCG CGACCACGGT GATCAATCGG CACGACTTCG GCGTGAGCTG GAACGCGCCA
ATGGATCGCG GCGGCATGGT CGTCGGCGAC GAGGTTGCGA TCACGCTCGA CGTCGAGGCC
ATCCTCGAAT CGGACATGCA GCGCATCGAC GCGATCCTGC ACCCCATTTG A
 
Protein sequence
MAKWIFEPGH SGAEFAVRHM MVSHMRGLFK NVHGSIDFDP DDPAGAAAVE ARIDAAGIWS 
GDEARDAHLR GPNFLDVATY PEIAFRSTEV RCVGEADLRV AGDLVLRGVT RRVVLDSRYL
GRWQCPYWEG DKDLGPTTRI GFLATTVINR HDFGVSWNAP MDRGGMVVGD EVAITLDVEA
ILESDMQRID AILHPI