Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1938 |
Symbol | |
ID | 3674048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 2031840 |
End bp | 2033108 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637710637 |
Product | diguanylate phosphodiesterase |
Protein accession | YP_315696 |
Protein GI | 74317956 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.509602 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.818289 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGGTAAGG AAACCTTTCT CGCGAGGCAA CCCATCGTCG ACGCCGCACA CGGCCTCTTC GCTTACGAGC TGCTGTTCAG GCAGTCGCTG AATTCCGTCT CCGCCCAGAT CGGCAGCCAG CTCCAGGCCG GCGTCGAGGT CATCAGCAAC ACCCTCTGTC TCGGGCCGGA GTGGCTGCTG CAGGGCAAGC TCGCCTTCAT CAATCTCGAC GAAGCGACGC TGATGAGCGA CTTCGTCTGC CTGCTTCCGC CGCATCACGT CGTCTACGAA ATCCTCGAGA CCGTGCCGAT GTCGGCGGTG CTGGTCGCCC GCATCCGCGA GCTCAAGCAG CTCGGCTACC GCTTCGCGCT CGACGATTTC GTCTGCCTCG AGGAATATCG CCCGCTGTTG CCGATGGTGG ACTTCGTCAA GCTCGACGTG CTCGAACAGC ATGCGGAAAA GACCGTCGAG ATCATCGCGC ACATCCGGCT CAACTTCCGC GGCCAGTTCA TCGCCGAGAA GGTCGAAAGC CGCGAGATGT TCGAGCTCTG CCGCGACGCC GGCATCGAGT ATTTCCAGGG TTATTATTTC GCCCGCCCGG AGAACTTCTC GAGCAAGACC ATCCAGCCCG GACAACTTGC GGTGCTCGAC CTGATGAACC AGGTTCGCGC GTGCGACGAC CTCGGCGAGA TCGAGGAGCC TTTGCGGCGC AACGCCGCGC TGACGCTGCG CCTGCTGCGC TACGCCAATT CGGCGGCGTC GGGCGTGCGC CAGCCGGTTC ACACGGTGCG CCAGGCGCTG ACGCTCGTCG GACTGAGGAC GCTCTACCGC TGGCTCGCGC TGCTCCTCGT CGTCGCCAAC CCGAGCCCGA CTAACCTCCT GCTCGCCCGC ACCGCCGTGA CCCGCGGACG CGTCTGCGAG CTGCTCGGCC AGCCGCGCCT CGACCGCGAC GCACAGGACG AACTCTTCAT CACCGGCTTG TTTTCGCTCG CGGGCCCACT CATGGGCACG CCGCTGCCCG ACCTGCTCGC GCGTCTGCCG ATGCCCGACG CGATCGTGCA GGCGCTGCTC GATCGCAGCG GTCCCTACGC ACCTTTCCTC GCGCTCGCCG AAGCGTCGGA GCGCAACGAT TTCGAGGCGA TCGCGCGGTA CGCGGGCGAG ATCGCGTGCC CACCCGAGGA GATCACCGTC GTCGAATTGC AGTCGCTCGC GTGGACGGAG GCGCTGAGCA CGGAAATGGC AGAAGACGCC GCCGCACCGG CTCGCACGCG CAGCGACACG CGCGCCTGA
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Protein sequence | MGKETFLARQ PIVDAAHGLF AYELLFRQSL NSVSAQIGSQ LQAGVEVISN TLCLGPEWLL QGKLAFINLD EATLMSDFVC LLPPHHVVYE ILETVPMSAV LVARIRELKQ LGYRFALDDF VCLEEYRPLL PMVDFVKLDV LEQHAEKTVE IIAHIRLNFR GQFIAEKVES REMFELCRDA GIEYFQGYYF ARPENFSSKT IQPGQLAVLD LMNQVRACDD LGEIEEPLRR NAALTLRLLR YANSAASGVR QPVHTVRQAL TLVGLRTLYR WLALLLVVAN PSPTNLLLAR TAVTRGRVCE LLGQPRLDRD AQDELFITGL FSLAGPLMGT PLPDLLARLP MPDAIVQALL DRSGPYAPFL ALAEASERND FEAIARYAGE IACPPEEITV VELQSLAWTE ALSTEMAEDA AAPARTRSDT RA
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