| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1918 |
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| Symbol | |
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| ID | 3674028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2012955 |
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| End bp | 2015441 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637710617 |
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| Product | hypothetical protein |
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| Protein accession | YP_315676 |
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| Protein GI | 74317936 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3170] Tfp pilus assembly protein FimV |
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| TIGRFAM ID | [TIGR03504] FimV C-terminal domain
[TIGR03505] FimV N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.123699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.927889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGA AGCGCTTCAC CACCCAGCTG GCCGCCGCCG GGCTTGTCGC CCTGCCGTTG
ATGGCGCACG CCGCCGGGTT GGGCAAGCTC TCGGTCACCT CGGCGCTCGG TCAGCCTCTG
GCAGCCGAGA TCGAGCTGTT CGCCGCCGAC AAGGCCGAGC TCGACAGCAT CTCCGCCACC
CTTGCATCGG ATCAGGCTTA CCGCGATGCA CGCGTCGATT TCTCCCCGGT GTTGTCGACA
CTGCGTTTCT CGGTCGAGAA GAAGCCCGGC GGCAAGGCCG TGCTCAAAGT CACGTCGAGC
CGACCGGTCA ACGACCCGTT CATCGACATG CTGGTCGAAC TGAGCTGGGC GTCCGGCCGT
CTGGTGCGCG AATACACGAT GCTCCTCGAC CCGCCCGGCA TGGCGAGCCC GCAGACCGTC
GCGCCCGTGG CTGTCACGCC GGCCCAATCT CCGGCGCGCG CGGCCCCGGC TCCGGTCGCG
CCGCCCGCTG CGCAACCGCC CGCCGCGGCT GACGCCCCCG TTTCCGAGCC GCCGGCGGCG
ACGGCCACCG CGACGCCCGC ACCGAAGTCG ACGGCACCGC AGGACACCGC ACCCACGCGC
GTCAAGGTCA AGCGCGGCGA CACACTGATC GGCATCGCCC AGCGCGTGCG CCCCGACAGC
GTCAGCCTCG AACAGACGCT CGTCGGCCTC TATCGCGAGA ACACGCACGC TTTCGTCGGC
AACATGAACC GCCTCAAGGC GGGCCGCACC TTGGCCGTAC CGACGGCAGA GGCCGTTGCG
GCGATTCCGC AGAAAGAAGC AGTGCGTGAA CTCAAGCTGC AGGCTGCCGA CTGGAACGCC
TACCGTCAGA AACTCGCGGC TTCCGTGAGC GGAACCGCCC CGACCGAGCC CGCGGCAGGT
CAGGCGAGCA GCGGCAAGGT CACGTCCAAA GTCGAAGACA AGGCGGCGGC CGCGGCGGCA
GACAAGAAAG ACGTGCTCAA GCTGTCCAAG GTCGCGCCGG CCGATAGCGC TGCGAACAAG
GGCGAGGCCA GTGCGCTGCA GGAGAAGCTC CGCGCCCAGG AAGAGGACGC GATCGCGCGA
CAGAAGGCGC TCGCAGAATC CGACCAGCGC GTCGCGCTGC TGGAAAAGCA GATTCAGGAC
ATGCAGAAGC TGGCCGACAT GAAAGCGCAG GCCCAAGCAC CGGCCGAGCC CGAGCCGAGC
GCCGCGTCCG CCGCTACCCC TGAGCCGGCC GCTGCGCCCG CAGAGCCGGC GAAGCCAGCG
CCGGTTGCTC CTGCCGTCGC CGCGCCACCC GCGGCACCGG CGTCCGCCGA AAACTGGTTC
GAGCCGCTGC TCGCCAACCC GCTTTACTGG GGCGGTAGCC TCGCCGCGGT GGGCCTGGGT
GGCGTCCTGT GGTGGATGAT GGCCGGCGGA CGGCGGCGCA AGACCGGCAC GACGGGGCTC
GAAGACAGCC TCATCACCGG CGGCGACGTG CGGCCCGACA CCGTGCTCGG TTCTGCCGCG
GGCGGCAGCG TCAATACCGG TGACACCTCC TTCCTCACCG ACTTCAGCCA GGCCGGGCTC
GGCACGATCG ACACCCACGA CGTCGACCCG ATCGCCGAAG CCGAGGTCTA CATGGCGTAC
GGCCGTGACG CGCAGGCCGA GGAAATCCTC AAGGAAGCGA TCGCCAAGAA CCCCGATCGC
CACGAGGTGC GGGTGAAACT GCTCGAAATC TATGCCGCGC GCCGCAATAC CGCCGCGTTC
GAGGCAGCCG CGGGCGAGCT CTACGCGGCG CTCGGCAGCA AGTCCAGCCC GCTCTGGGAC
AAGGCCTGCG AGATGGGACG CGGGATCGAC CCGACTAACC CTCTGTACGG GGGTGTCCAG
TCGAGCGCGG CGCCTGCAGC CGCCGCGGCG ACATTCGCTG CGACGCCGGC GGTCGCCGGC
GGGGCGGTGG GCTTCGATAC CGAGCGCGTC GTCGATGCGG GAAATGCAAT CTCCGCGGAA
ACGGCGCACT CCACCGCGGT GGAGACCGAG CGCCCGCAGG CCGTCGACGC GGCCGTGGCG
GCCGTGGCAA GTCCGGTGCT CGACTTCGAG TCGGCCGGGC AGGCGCCCGC ATTCGAGCGC
CGCGCGGGGG GCGGCGGCGC CGCGGTTACG GCGGACGCTG ACGAGACCGC GGCGGACGAC
GGCCTCCTCG ACCTCGAGGG GCTGAGCTTC GATCTGCCCG CGCTGGATAC GTCCGCATCG
ACGGATGACA CGCTCAACGT CGGCCTCGGT CTCGAAGACG ACAAGCCGGC CGACGGTAAA
TTCGATTTCA GCGGCCTCGA TCTCGATCTC GGCGATGGCA GCAACGACGT CGAGCTCGAC
GAAGTCGGCA CCAAGCTCGA CCTCGCACGC GCCTATGTGG AAATGGGCGA CAAGGAAGGG
GCGCGCGAAA TCCTCAACGA AGTGGTGACC GAAGGCAACG ACAGCCAGAA GGCCGACGCG
AAAGGCATGC TGGGCGCACT TGGCTAA
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| Protein sequence | MKLKRFTTQL AAAGLVALPL MAHAAGLGKL SVTSALGQPL AAEIELFAAD KAELDSISAT
LASDQAYRDA RVDFSPVLST LRFSVEKKPG GKAVLKVTSS RPVNDPFIDM LVELSWASGR
LVREYTMLLD PPGMASPQTV APVAVTPAQS PARAAPAPVA PPAAQPPAAA DAPVSEPPAA
TATATPAPKS TAPQDTAPTR VKVKRGDTLI GIAQRVRPDS VSLEQTLVGL YRENTHAFVG
NMNRLKAGRT LAVPTAEAVA AIPQKEAVRE LKLQAADWNA YRQKLAASVS GTAPTEPAAG
QASSGKVTSK VEDKAAAAAA DKKDVLKLSK VAPADSAANK GEASALQEKL RAQEEDAIAR
QKALAESDQR VALLEKQIQD MQKLADMKAQ AQAPAEPEPS AASAATPEPA AAPAEPAKPA
PVAPAVAAPP AAPASAENWF EPLLANPLYW GGSLAAVGLG GVLWWMMAGG RRRKTGTTGL
EDSLITGGDV RPDTVLGSAA GGSVNTGDTS FLTDFSQAGL GTIDTHDVDP IAEAEVYMAY
GRDAQAEEIL KEAIAKNPDR HEVRVKLLEI YAARRNTAAF EAAAGELYAA LGSKSSPLWD
KACEMGRGID PTNPLYGGVQ SSAAPAAAAA TFAATPAVAG GAVGFDTERV VDAGNAISAE
TAHSTAVETE RPQAVDAAVA AVASPVLDFE SAGQAPAFER RAGGGGAAVT ADADETAADD
GLLDLEGLSF DLPALDTSAS TDDTLNVGLG LEDDKPADGK FDFSGLDLDL GDGSNDVELD
EVGTKLDLAR AYVEMGDKEG AREILNEVVT EGNDSQKADA KGMLGALG
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