| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1888 |
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| Symbol | |
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| ID | 3673998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1986809 |
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| End bp | 1988056 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637710587 |
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| Product | hypothetical protein |
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| Protein accession | YP_315646 |
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| Protein GI | 74317906 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAT TGTTCCTCCC CAGAACATGG ACGCCCCCCG TCCTCGCCTG GTCTTTCCTG
CTGCTCCTGC CATTCGCTCG CTCGTCCGAG TTGCCCATGT TCATCATGGC CATCCTCGGC
GGCATTCTGC TCTGGAAGCA TGGCCGGGCG GTCGCGTGGG AAGGCGGCGC CAAGACCTTC
AGCCTGCTGT TCCTGTGCAT CTGGGTGCCG ATAGCGCTGT CCGTGCCTGA CTCGCTCTGG
TTCAAGAAGT CACTGAGCAC CGCGCTTACC TTTCCGCGTA TCTGGCTCGC CGGTCTGTAT
CTGATCTGGA TGCTGCGCGA GCCTTTGGCG CGCGAGCGCC TCTTCAAGCT GTCCGCGTGG
CTGTTGGTGT TCTGGGTGGT CGACGCCTTG ATTCAGGCAA TCGTCGGCTA CGATCTGTTC
GGCCACGCTT ACCCGGAACG CCTGAACGGC ATATATGGCC CGACCAACTG GAAGCTCGGC
CTCACGCTGG CGATGCTGTC GCCGATTGTG TGGGAATATT TCTCGCGCCA CGGCACTCGC
TGGCAATTGG CATTGGCCTG GCTCGGCACA GCGGCCGTGG TCCTCCTCGC GAGCAATCGC
GAAAGCTGGA TCGTCTTCGC CGTCGCGACC GTGATGTGGA CTTGGGTTTA TGCGCGGAGG
CTCGCGTTTC ATCCGGTGAG GTTACTCGGG CCGCTTGTGG TGGCAGCGGT GGTCGCGGGT
GTCGGAGTGT ATCAAGTCAA CCCGAAGTTT GCCCAGCGCG TGGATCAATC CTTGTCGGCG
TTTGACTTCA CGTATGAAAG CCTGAACAAC GCCAGTTCCT ATAGGGTTCA CTTGTGGAAC
AATGCGCTCA CCGTCCTGAA GAATCACCCC GTAAATGGGG CAGGGGTCCG TAGTTATCGC
TACGCATATG CCAAGTATGC GAAGCCGAAC GACCCTTACT TAAGTCCGGA CGGGACGGGG
ATGATTTACG CCCATCAATT GGTGCTGGAG GTTGGCTCAG AAACCGGGGG CATTGGATTG
GTCGGGTTGC TGATGTTTTT CGCGGTTCTG ATCCGGTCGG CGCAGGGGAT GTCTCGGGAG
TACTTGGCTT GGCCGGCTTG GCTGGGGGTA TTCGCCTGGC TCTTCCCTTT CAATACGCAT
ACCGCGATTT ATTCGGCCTA TTGGTCGCTG GTGGTCGGGT GGATGATCGC TATTTCCCGG
ACCGCGCCGT CCGTCGAACA CGTCTCATCG AATAGGCCAT ACACGTAG
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| Protein sequence | MKSLFLPRTW TPPVLAWSFL LLLPFARSSE LPMFIMAILG GILLWKHGRA VAWEGGAKTF
SLLFLCIWVP IALSVPDSLW FKKSLSTALT FPRIWLAGLY LIWMLREPLA RERLFKLSAW
LLVFWVVDAL IQAIVGYDLF GHAYPERLNG IYGPTNWKLG LTLAMLSPIV WEYFSRHGTR
WQLALAWLGT AAVVLLASNR ESWIVFAVAT VMWTWVYARR LAFHPVRLLG PLVVAAVVAG
VGVYQVNPKF AQRVDQSLSA FDFTYESLNN ASSYRVHLWN NALTVLKNHP VNGAGVRSYR
YAYAKYAKPN DPYLSPDGTG MIYAHQLVLE VGSETGGIGL VGLLMFFAVL IRSAQGMSRE
YLAWPAWLGV FAWLFPFNTH TAIYSAYWSL VVGWMIAISR TAPSVEHVSS NRPYT
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