| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1879 |
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| Symbol | |
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| ID | 3673989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1976102 |
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| End bp | 1977424 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637710578 |
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| Product | putative dehydratase RfbH |
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| Protein accession | YP_315637 |
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| Protein GI | 74317897 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.494911 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCCT CTTCCGCAAT GTTAAAGGAA CAAATCCTTT CTCTCGTAAA CCAGTACGCC
GACCAGGTAA TGTCTTCTAA GCCGTTCACG GCGGGTCAAT CGGTCATCCC ACCGTCTGGC
AAGGTAATAG GCGCATTGGA GCTCCAATAC ATGACCGAGG CGGCTCTCGA TGGTTGGCTC
ACGACCGGCC GTTTTAACGA AGCGTTCGAG TTAGAGCTTG CGAAATTTCT CGGCGTCAAA
CACGTCCTCA CGACGAACTC CGGGTCGTCA GCCAATCTGC TGGCACTGGC TGCGCTGACG
TCACCCAAGC TGGGAGATAG AGCATTGCGG CCTGGCGACG AGGTCATTAC GGTGGCCGCA
GGGTTTCCGA CGACCGTCAA CCCGAGCATC CTGTTCGGTC TAATACCGGT GTTCGTGGAT
GTGCATATCC CAACATACAA CATTGATCCC GCCAAGATCG AAGCCGCGAT CAGTCCCAAA
ACCCGCGCCA TCATGATTGC TCACACTCTG GGCAATCCGT TCGACATCGA TGCAGTTACG
CGACTGGCTA AGCAGCATAA TCTCTGGCTC ATCGAGGACT GCTGCGATGC GCTGGGTTCT
ACCTATGACG GACGCAAGGT CGGCACCTTC GGCGACATTG GAACTCTGAG TTTCTACCCT
GCCCATCACA TCACAATGGG AGAAGGCGGC GCAGTATTCA CCAACGATGG ACTACTCAAG
ACCATTATCG AGTCATTCCG CGATTGGGGT CGGGACTGCT ACTGTGCGCC CGGCAAGGAC
AATACCTGCG GCAAGCGTTT TGGCTGGAAG TTGGGCACGC TCCCTTTTGG CTACGATCAC
AAATACACGT ACTCGCACCT CGGGTTCAAC TTGAAGATCA CCGACATGCA GGCGGCATGC
GGGCTCGCTC AGCTACAGCA GGTGGATCAT TTCATTGAGA CGAGAAAGCG AAATTTCAAC
TATCTGCGGG ACCGATTGAA AAGATCGTGC CAAGAATTCC TCATCCTGCC TGAGGCGACA
CCCAAATCGG ATCCGTCGTG GTTTGGGTTT CCGATTACCT TGCGAGACGA CGTCGAGTTC
GATCGAGTCG CGCTCCTCCA GTATTTGGAC GAGAGAAAAG TTGGCACGCG ACTGCTTTTT
GCGGGAAACC TCACACGCCA GCCCTACATG ACTGGCCGGA ATTATCGCGT CGCAGGCACT
TTGAACAATA CGGATATCGT GATGAATAGT ACTTTCTGGG TCGGTGTGTA CCCCGGCTTG
ACCGAAGAGA TGCTGGAGTA TATGGCGGTC CAGATTGAGT TGTTCCTCGG AATTGGGTTC
TAA
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| Protein sequence | MESSSAMLKE QILSLVNQYA DQVMSSKPFT AGQSVIPPSG KVIGALELQY MTEAALDGWL
TTGRFNEAFE LELAKFLGVK HVLTTNSGSS ANLLALAALT SPKLGDRALR PGDEVITVAA
GFPTTVNPSI LFGLIPVFVD VHIPTYNIDP AKIEAAISPK TRAIMIAHTL GNPFDIDAVT
RLAKQHNLWL IEDCCDALGS TYDGRKVGTF GDIGTLSFYP AHHITMGEGG AVFTNDGLLK
TIIESFRDWG RDCYCAPGKD NTCGKRFGWK LGTLPFGYDH KYTYSHLGFN LKITDMQAAC
GLAQLQQVDH FIETRKRNFN YLRDRLKRSC QEFLILPEAT PKSDPSWFGF PITLRDDVEF
DRVALLQYLD ERKVGTRLLF AGNLTRQPYM TGRNYRVAGT LNNTDIVMNS TFWVGVYPGL
TEEMLEYMAV QIELFLGIGF
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