Gene Tbd_1833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1833 
Symbol 
ID3671498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1932226 
End bp1932831 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content64% 
IMG OID637710532 
Productubiquinol-cytochrome c reductase, iron-sulfur subunit 
Protein accessionYP_315591 
Protein GI74317851 
COG category[C] Energy production and conversion 
COG ID[COG0723] Rieske Fe-S protein 
TIGRFAM ID[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.274729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGG AAGCCGATGG GCAAAAAGTG GACACACGTA AACGAAAATT CCTGATCGCT 
GCGACCAGCG CCGTAGGCGG TGTCGCAGTG GCGGGCGTCG CCGTTCCTCT TGTGATGAGC
ATGATGCCGA GCGCCCGCGC CAAGGCAGCC GGCGCGCCGG TCGAAGTCGA CGTCAGCAAG
ATCGAGCCTG GCATGCTGCT CACCGTCGAG TGGCGTGGCA AGCCGGTGTG GATCGTCAGC
CGCACGAAGG AGATGCTCGA CAAACTGTCG ACCCTGGACG GCCAGCTCGC CGACCCCAAG
AGCGAGATGC CTCAGCAGCC TGAATACTGC ACAAATCCGG TGCGCTCGAT CAAACCCGAA
CTCCTCGTCG CGGTCGGCAT CTGCACCCAC CTCGGTTGTT CTCCCACGTA TCGCAAGGAC
GTCGGCGCCG CCGATCTCGG CGCCGACTGG CCGGGCGGCT TCTTCTGTCC TTGCCACGGC
TCTCGCTTCG ACCTGGCCGG ACGCGTCTAC AAGGGCGTGC CCGCACCGAC CAATCTCGTG
GTCCCGCCTC ATCAATACCT CAGCGACGCC AAGCTGCTGA TCGGTGTAGA CGCAAAAGGA
GCCTAA
 
Protein sequence
MSQEADGQKV DTRKRKFLIA ATSAVGGVAV AGVAVPLVMS MMPSARAKAA GAPVEVDVSK 
IEPGMLLTVE WRGKPVWIVS RTKEMLDKLS TLDGQLADPK SEMPQQPEYC TNPVRSIKPE
LLVAVGICTH LGCSPTYRKD VGAADLGADW PGGFFCPCHG SRFDLAGRVY KGVPAPTNLV
VPPHQYLSDA KLLIGVDAKG A