| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1804 |
|---|
| Symbol | |
|---|
| ID | 3671468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 1906424 |
|---|
| End bp | 1907107 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637710502 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_315562 |
|---|
| Protein GI | 74317822 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.206043 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAACCA ATAACGGGAT GGTGCTGGCG CTCGGCGCGG CGATGATCGT AGCGAGCGGG
GTCAGCGGCA CGGCCGCGGC CGCAACGACT TTATACGGGG CAACCGTCGA CTTCACTATA
GATAGCCCGC TCGGGCTCTT TGGTGAAGCG AGCGTCGCGG GTGACAGCCT CGTCTTTACA
CCCAATGCGG TCGGTCCGTC CGGGCCCACC GACTTTTACG CCGACGGCAG CAGTCTGTAT
GCCAGCCAGA CCGTCCATAT CACGGTGACC GCGCATGGCG GCTACGCATT GACGGGCTTC
GATCTCTCCG AATCCGGGGG CTACGCGGTC GCGGGCGGTA CGGCGTGGAT CGCGGGCGAC
CTCAAGGCGA TCGACATCGA AGGTTCAACC GCGAATCAAT TGACCGCCGC CATCCTCGGC
TCGACCCTGG TCGGCACAAG TGGCAACTGG ACCGCAGCGG CGTCGATTGG GCTTCCGTCG
TCGGGCTGGG GCGGCTCCGA CGGCGTCGTC AACAGCGTGA CGCTCACGCT CTCGAATCAG
CTTTTCGCGA TGGGCGCAGC CGAGATCTGG AAAAATGGCG CTACTGTCGC GGCGGTCACT
GCCCCGGTTC CGGAAGCCGA CACCTATCTC ATGATGCTCG CCGGCCTGGG GATGGTTGGC
TTGTTTGCGA GACGTCGCGC TTGA
|
|---|
| Protein sequence | MGTNNGMVLA LGAAMIVASG VSGTAAAATT LYGATVDFTI DSPLGLFGEA SVAGDSLVFT
PNAVGPSGPT DFYADGSSLY ASQTVHITVT AHGGYALTGF DLSESGGYAV AGGTAWIAGD
LKAIDIEGST ANQLTAAILG STLVGTSGNW TAAASIGLPS SGWGGSDGVV NSVTLTLSNQ
LFAMGAAEIW KNGATVAAVT APVPEADTYL MMLAGLGMVG LFARRRA
|
|---|
| |