Gene Tbd_1784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1784 
Symbol 
ID3671448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1883495 
End bp1884700 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content59% 
IMG OID637710482 
Productglycosyltransferase 
Protein accessionYP_315542 
Protein GI74317802 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTGA TCAATGTTGG GCAGAATTAC CATCTCCGAG GGGGATCGGA CAAATATCTG 
TTCTCACTCG AGAGTTTGTT GCGTGACCAC GGCCATGAAG TGATCCCTTT CGCGTCGCGG
CAGGCCTCCA ACATCGAAAC GCCCTGGTCG TCCTATTTTC CGCCAGAAGT GGACTTCCAG
CGCCCGCGCC CGGTTGACGT CCTCCGGTAT GCGTATTCCC AGCCAGCGCG CGAAGCGATG
CGAAAACTGG TTCGAGAGCA GACGCCCGAC ATCGCACATC TTCACATCTA TTACGGCCAA
CTCACGGCAT CGATTCTTGC TCCGCTGGCC AATGCCGGGA TTCCCGTCGT GCAAACGCTT
CACGAATACA AAATCGTGTG CCCGACCTAC AGTTTGTTCG CGCATGGGGA AATCTGCGAG
GCATGCGAAG GGCGCCATTT TTGGCGAGCG GCGGCACGCC GCTGCAATCG TGGTTCTTTC
GTGCGTTCGG CCCTGAGCGC GACGGAAGCA TACGTCTCGA GATGGCTAGG CGCGGTGGAT
AAGGTCAGCC ACTTCATCGC GGTAAGCGAT TTTCTGCGCG ACAAGGTGGT TTCGATGGGC
GTGCCGGGGA ACAAGGTCAC GACCGTACAT AATTTCATGG ATTGCGCCGG CATCGAACCG
GCGCGCGAGC TGGGCACGTA TCTTCTCTAT TTCGGCCGGC TGGAGCGCAT CAAGGGCATC
TACACACTGC TTGAAGCCGT GGCGCCTCTG AGGGACACCC CCCTGCTGAT TGTGGGCGAC
GGGAACGAGA AGACGCTTCT GCAGAGCGAG ATTACGCGAC GCGGTCTGGA TCACGTGAAG
CTGCTCGGGT TCAAGCAGGG GCAGGAGCTG CGCGACTTGA TCCGCGGAAG TATCTGTACG
ATCGCGCCTT CGGTCTGTTA CGAAACCTTC GGCCTGACGC TCGTCGAGTC GTTCGCGCAC
GGCAGGCCGG TGGTGGCCAG TCGGATCGGC GGCATGACAG AAGTGGTCGC GGATGGCGTG
GATGGCTTTC TTGTTCGACC AGGGGGTATC GAGGAATTGA GGGAACGCTT ATTGTGGATG
ACAACCCACC CGGACCGCGC GCTGGAGATG GGGCGCCATG GTCGAGCCAA AGTTCTAAGT
CAGTTTTCTC CGGAGCGCCA TTACGAAAAG GTTATGGCGG TTTACGGAAA AGTAGCGAAC
CGATGA
 
Protein sequence
MRVINVGQNY HLRGGSDKYL FSLESLLRDH GHEVIPFASR QASNIETPWS SYFPPEVDFQ 
RPRPVDVLRY AYSQPAREAM RKLVREQTPD IAHLHIYYGQ LTASILAPLA NAGIPVVQTL
HEYKIVCPTY SLFAHGEICE ACEGRHFWRA AARRCNRGSF VRSALSATEA YVSRWLGAVD
KVSHFIAVSD FLRDKVVSMG VPGNKVTTVH NFMDCAGIEP ARELGTYLLY FGRLERIKGI
YTLLEAVAPL RDTPLLIVGD GNEKTLLQSE ITRRGLDHVK LLGFKQGQEL RDLIRGSICT
IAPSVCYETF GLTLVESFAH GRPVVASRIG GMTEVVADGV DGFLVRPGGI EELRERLLWM
TTHPDRALEM GRHGRAKVLS QFSPERHYEK VMAVYGKVAN R