Gene Tbd_1721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1721 
Symbol 
ID3671304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1807044 
End bp1807778 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content66% 
IMG OID637710411 
Producthypothetical protein 
Protein accessionYP_315479 
Protein GI74317739 
COG category[S] Function unknown 
COG ID[COG1704] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.920503 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAG TGTTCCAGGA GACCGACATG CTCAAATGGC CCGACGCATT CAAATGGCTA 
GGTGCGACAT TGCTGGCGTT GATGCTTTCC GGTTGCGGCT ACAACACGCT GCAGACGACG
GACGAGGACA TCAGCGCGAC CTGGGCCGAA GTGCTCAACC AGTATCAGCG GCGGGCCGAC
CTCGTGCCCA ACCTCGTCAA TGTCGTGAAA GGCTACGCCG CGCACGAACG CGAGGTGCTG
ACGCGCGTCA CCGAAGCGCG CGCGCGCGTC GGCGCGATCC AGGCGACACC CGAGCTCGTC
AACGACGAAG CCGCGTTCCA GCGCTTCATC GCCGCGCAGG GTGAGCTCAC CGGGGCGATC
TCCCGGCTTT TGCTGGTTGC CGAAAACTAC CCGCAACTGA AAGCCGATGG CGCATTCCGC
GACTTGCAGG CGCAGCTGGA GGGCACCGAG AACCGCATTG CAGTCGCGCG CAACCGCTAC
ATCGCCGCGG TGAAGACGTA CAACGTGACC GTGCGGTCTT TTCCCAGCAA CCTCACCGCG
ATGCTGTTCG GCTTCGAGAC CAAACCGACC TTCACGGTGG AGAACGAGCG CGCGATCGCG
GCGCCGCCCA CCGTCGACTT CGGCACGCAA GCGCCTGCCG CGGCGCCGGA ACGACTGCGT
TCGCCACCGG GCGCACCGGC GAACGCGCCT GCCAACCAAG GCGCCCCGGC GGGCAGCGGT
GCAGCGGGCT ATTGA
 
Protein sequence
MTRVFQETDM LKWPDAFKWL GATLLALMLS GCGYNTLQTT DEDISATWAE VLNQYQRRAD 
LVPNLVNVVK GYAAHEREVL TRVTEARARV GAIQATPELV NDEAAFQRFI AAQGELTGAI
SRLLLVAENY PQLKADGAFR DLQAQLEGTE NRIAVARNRY IAAVKTYNVT VRSFPSNLTA
MLFGFETKPT FTVENERAIA APPTVDFGTQ APAAAPERLR SPPGAPANAP ANQGAPAGSG
AAGY