| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1668 |
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| Symbol | |
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| ID | 3673053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1751359 |
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| End bp | 1753338 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637710355 |
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| Product | oligopeptidee ABC transporter, ATP-binding protein |
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| Protein accession | YP_315426 |
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| Protein GI | 74317686 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
[TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCCGC TGTTGCAGGT CGACCGGCTC GTCACCGCGT TCGGCGAGGG TAAAGACGCC
GTGGGCGTCG TCGACGGGGT GTCGTTCCGC GTCGACGCGG GCGAGACCTA CGCGCTGCTC
GGCGAATCCG GCTGCGGCAA GTCGATGACG GCGCTGTCGC TGATGCGGCT CCTTCCGGAC
GGCGGGCGCA TCGTTTCGGG CGAGATCCGG CTCGGCGAAA CCGACGTGCG GGCGCTGCCG
GAACGCGAGA TGCGCCGGGT CCGCGGCGGG CAGATGGGGA TGATCTTTCA GGAACCGATG
CTCGCGCTGA ATCCGGTCGC CAACGTCGGC GCTCAAATCG TCGAGGCGCT TGCACTGCAC
CAGCGGCGCA CGGGCCGCGA CGCCCTCGCG GCGGCGCGTG CGCTGCTCGA GTCGGTCGGC
GTGCCCGACC CGGAGCGTCG GCTCGATGCC TATCCGTTCG AACTTTCCGG CGGTCTGCGC
CAGCGCGTGA TGATCGCGAT GGCGCTCGCC GGCCCGCCGC GCCTGCTGAT CGCCGACGAG
CCGACGACGG CGCTGGACGT GACGATCCAG GCGCAGGTGC TCGAGCTGCT GCGTGGCCTG
CGCGCCGAGC GCCAGATGGG AATGCTGCTG ATCACGCACG ACCTTGGCGT CGTGGCGGAG
AACGCCGATC GCGTCGGCGT CATGTACGCC GGCGAACTGC TCGAGGAGGG GCCGCGCGAG
ACGTTCTTCG CCGCGCCGCA GCACCCCTAC AGCCGCATGC TGTTCGAGGC CCTGCCACGG
CCGGGGGACC ATGGGCGGCT CGTGACGATT CCCGGTCAGG TGCCGAAGCT CGATGCGCGG
ATGTCCGGCT GTCGGTTTGC CCCACGCTGT CCGAGCGCGA TCGCGCGTTG CCGCGAGGAG
GCGCCGGACT GGCAGGTGCG CGGAGGACAA CGCGTGCGTT GTCATCTGGC CGGCGAGCTG
CCAACGCAGG GGGCACCTGC GGTCTCGCCA CCGCCCGGTT CGGCGCGGGA CGCGGCACCG
CTGCTGCAGG TGGAGGGACT GAAGGTCTAT TTTCCGATCC GCCGCGGCCT GATCCAGCGC
ACGATCGGCC ACGTTCGCGC GGTCGACGAC GTCTCGCTGT CGATCCGTGC CGGGCGTACG
CTCGCGCTGG TCGGCGAATC CGGATGCGGC AAGACCACCG CCGGTAAGGC GCTGCTGCGC
CTGATCGAGC CGACCGGGGG GCGTGTCCTG CTCGGCGGCG AGCCGATTAC GCCGGCCAAC
GCGCGCACGC TGCGGCGCCA GGCGCAAATG GTCTTCCAGG ACCCCTACAG CTCGCTAAAC
CCGCGCATGC GCGTCGAGGA AATCGTGCTC GAAGGCATGG ATGCCCTGCG CGTTGGGGCG
GAGCGCGGGC GGCGCGAAGC GGTGGCAGCC GTGCTGCGCC AAGTCGGGTT GCCTGATGAT
GCCGGCGGCC GCTATCCGCA CGCCTTCTCT GGCGGGCAAC GCCAGCGGAT TGCGATCGCG
CGCGCGCTCG CCGTCTCGCC GCGACTGTTG ATCTGCGACG AGCCGACGAG CGCACTCGAC
GTCTCGGTCC AGGCCCAGAT ACTCAATCTG CTCAAAGATC TGCAGGAAAG CCTGGGGCTC
GCCTACCTCT TCATCACCCA CAACCTCGGC GTCGTCGAAT ATCTCGCGCA CGAGGTGGCC
GTGATGTATC TCGGCCGCAT CGTCGAGCAG GGGCCCGCCG CCGAGGTGCT GCGCGCGCCG
CGCCACCCGT ACACCCAGGC GCTCGTCAGC GCCATCCCGC GCATCGATGG CGCAAGCGGG
CTGGCGACGC TACATGTGGG CGGTGACCAG CCGTCGCCGC TCGCGCCGCC GCCGGGCTGC
CACTTTCACC CGCGCTGCCC GCGCGCGGGC GACCTGTGCC GGCGCGATTA CCCGGAACAG
ACGCGAGCCG GGGACGGGCA TTGGGTGCGG TGTCACTGGG TGGCGGGCAG GCTCGGATGA
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| Protein sequence | MKPLLQVDRL VTAFGEGKDA VGVVDGVSFR VDAGETYALL GESGCGKSMT ALSLMRLLPD
GGRIVSGEIR LGETDVRALP EREMRRVRGG QMGMIFQEPM LALNPVANVG AQIVEALALH
QRRTGRDALA AARALLESVG VPDPERRLDA YPFELSGGLR QRVMIAMALA GPPRLLIADE
PTTALDVTIQ AQVLELLRGL RAERQMGMLL ITHDLGVVAE NADRVGVMYA GELLEEGPRE
TFFAAPQHPY SRMLFEALPR PGDHGRLVTI PGQVPKLDAR MSGCRFAPRC PSAIARCREE
APDWQVRGGQ RVRCHLAGEL PTQGAPAVSP PPGSARDAAP LLQVEGLKVY FPIRRGLIQR
TIGHVRAVDD VSLSIRAGRT LALVGESGCG KTTAGKALLR LIEPTGGRVL LGGEPITPAN
ARTLRRQAQM VFQDPYSSLN PRMRVEEIVL EGMDALRVGA ERGRREAVAA VLRQVGLPDD
AGGRYPHAFS GGQRQRIAIA RALAVSPRLL ICDEPTSALD VSVQAQILNL LKDLQESLGL
AYLFITHNLG VVEYLAHEVA VMYLGRIVEQ GPAAEVLRAP RHPYTQALVS AIPRIDGASG
LATLHVGGDQ PSPLAPPPGC HFHPRCPRAG DLCRRDYPEQ TRAGDGHWVR CHWVAGRLG
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