Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1635 |
Symbol | flgD |
ID | 3673020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 1721320 |
End bp | 1721985 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637710322 |
Product | flagellar basal body rod modification protein |
Protein accession | YP_315393 |
Protein GI | 74317653 |
COG category | [N] Cell motility |
COG ID | [COG1843] Flagellar hook capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.904883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACGG TACAAGACGC GAGCTCGGTC GGCAGCCTGT TCGGCGCCGA AGCGGCCAAG ACTTCAAAAA GCGGGTCGAG CGACACGCAG GACCGCTTCC TGAGTCTCCT GGTCGCGCAG ATGAAGAACC AGGATCCGCT CAATCCGCTC GACAACGCCG AGGTCACGAG CCAGATGGCG CAGCTGTCGA CGGTCGAGGG CATCGAGAAC ATGAACAAGA GCCTCGAAGC GCTGGCATCG AGCATGGGCG CGAGCCAGAT GTCGCAGGCG GCCAACCTGA TCGGTCACGC CGTGCTCGTG CCGGGCAATG CGGTCGGTCC GGGCCAGCTC GAGAACCTCA TGGGATTCGA ACTGACGCGA CCGGCCGACA AGGTCACGCT CGACATCCAT GATGCGGGCG GCAACCTTGT TCGCAGCGTC GACCTCGGCC CGCGCGATGC GGGTGTCAAC GTCGTCGCCT GGGACGGGTT GACGGGCAGC GGCGCCGTCG CACCGGCCGG CGCCTACAGC TTCAAGGTCA GCGCCGTGCA AGGCGGTCAG GCGCAGAGCA GCATCGCGCT CAACGTCGGC CTGGTGAACA GCGTGTCGCA GAACAGCGAG GGCGTGCAAC TCAATCTGGC AGGAAACGGC AGCGTCGGCT ACGCCGACAT TCGAGAGATC TTCTGA
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Protein sequence | MSTVQDASSV GSLFGAEAAK TSKSGSSDTQ DRFLSLLVAQ MKNQDPLNPL DNAEVTSQMA QLSTVEGIEN MNKSLEALAS SMGASQMSQA ANLIGHAVLV PGNAVGPGQL ENLMGFELTR PADKVTLDIH DAGGNLVRSV DLGPRDAGVN VVAWDGLTGS GAVAPAGAYS FKVSAVQGGQ AQSSIALNVG LVNSVSQNSE GVQLNLAGNG SVGYADIREI F
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