Gene Tbd_1633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1633 
SymbolflgF 
ID3673018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1719287 
End bp1720027 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content68% 
IMG OID637710320 
Productflagellar basal body rod protein FlgF 
Protein accessionYP_315391 
Protein GI74317651 
COG category[N] Cell motility 
COG ID[COG4787] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.655362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.906054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGTC TGATCTACAC CGCCATGACC GGCGCCAAGC ACGCGCTCGA GCAGCAGGCG 
ACGACTTCGC ACAACCTCGC GAACGCGACG ACGACGGGCT TTCGCGCACA GATCGACCAG
TTCCGCGCGG TGCCGGTGCA GGGCGCGATC CTGCCGACGC GGGCCTTCGT CGTCGACTCG
ACCACGGGCA GCGACTTCCG CTCCGGCGCG ATCCAGCACA CCGGGCGCGA ACTCGACATG
GCCGTGCAGG GCGACGGCTG GATCGCGGTG CAGGCCCCCG ATGGCAGCGA GGCCTACACG
CGCAACGGCA GCCTCAAGCT CGACGAGAAC GGCGTGCTGC TGACGCGCGA CGGGCTTCAG
GTGATGGGCG ACGGCGGACC GCTCTCGATC CCGCCAGGCC GTAACGTCGC GGTCGGCAAG
GACGGCACGA TTTCGCTCGT GCCCGACGGC TCGGCGGCGA CAGGCCTGAC GTCGATCGGG
CGCATGAAGC TCGTGAACCC GCCGGCAGGC GATCTCGTGC GCGGTGACGA CGGCCTGTTC
CGCCTCAAGG ACGGCGGCGC GGCCGACGTC GATCCGAAAG TCGCGTTGAT CGGCGGGGCG
CTCGAGTCGT CCAACGTCAA CGTCGTCGAC GAGATGGTCA ACATGATTTC GCTTGCGCGC
CAGTTCGACA TGCACATGAA GCTCTTGCAG CACGCCGAGA ACAACGACAG CAAGGCAGCC
CAGCTGCTGA GCATGAGCTG A
 
Protein sequence
MDRLIYTAMT GAKHALEQQA TTSHNLANAT TTGFRAQIDQ FRAVPVQGAI LPTRAFVVDS 
TTGSDFRSGA IQHTGRELDM AVQGDGWIAV QAPDGSEAYT RNGSLKLDEN GVLLTRDGLQ
VMGDGGPLSI PPGRNVAVGK DGTISLVPDG SAATGLTSIG RMKLVNPPAG DLVRGDDGLF
RLKDGGAADV DPKVALIGGA LESSNVNVVD EMVNMISLAR QFDMHMKLLQ HAENNDSKAA
QLLSMS