Gene Tbd_1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1625 
Symbol 
ID3673010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1711923 
End bp1712285 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content63% 
IMG OID637710312 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_315383 
Protein GI74317643 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.608115 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAA TACTTGCAGT AGACGACTCG GGGTCGCTGC GTCAGATGCT GTCCTTCAGT 
CTGAAGGCGG CCGGCTACGG CGTGATCGAG GCCGTCGACG GCGAGGACGG CCTGAAGAAG
GCGAAGCAGC AGAAGGTCGA CCTGGTCCTC ACCGACCAGA ACATGCCCGG CATGGACGGC
CTGACCCTGA TCAAGGCGCT ACGCGGCATG GCGAACTACA AGAGCGTGCC GATCCTGATG
CTGACGACCG AATCGGGCGA CGACATCAAG GCGATGGGGC GTGCCGCGGG CGCGAACGGC
TGGCTGGTCA AGCCCTTCGA TCCGGCGCGC CTGACCGAAG TGGTGAAGAA ACTGATCGGC
TGA
 
Protein sequence
MKTILAVDDS GSLRQMLSFS LKAAGYGVIE AVDGEDGLKK AKQQKVDLVL TDQNMPGMDG 
LTLIKALRGM ANYKSVPILM LTTESGDDIK AMGRAAGANG WLVKPFDPAR LTEVVKKLIG