Gene Tbd_1609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1609 
Symbol 
ID3672994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1693345 
End bp1693779 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content71% 
IMG OID637710296 
Productflagellar biogenesis protein FliO 
Protein accessionYP_315367 
Protein GI74317627 
COG category[N] Cell motility 
COG ID[COG3190] Flagellar biogenesis protein 
TIGRFAM ID[TIGR03500] flagellar biosynthetic protein FliO 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.796817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.163037 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCATT TCCGCTACGT CGCGTCGCTG CCGCTCTGCG CGCCCGCGCT CGCGCGCGCA 
GCCGACGCCC CGGTATCGGC CGCCGGCAGC CTTTTGCAGG TCTTCGTCGG CCTCGTCGCC
GTCCTGCTGC TGATCGCGGC GACCGCCTGG GTCGCCAAGC GCTTCGGCGT CGCGCGGCCC
GGCGCGTCGA GCCTGCTGCA GATCGTGAGC AGCGCCTCGG TCGGTGCACG CGAGCGCGTC
GTCGTCGTCG AGGTCGGAGA AACCTGGCTT GTCGTCGGCG TCGCGCCGGG CAGCGTCAAC
GCGCTCGCCA CACTACCGAA GGGCACCGTG CCGCCGCAGG CCGGCTCGGG GATCGGACTC
GGCTCCCCCT TCGCCGCCCG CCTGCAACAG CTCATCGAAA AATCTCCCTA CGGGGACAAG
CGTCGTGAAA AGTAA
 
Protein sequence
MTHFRYVASL PLCAPALARA ADAPVSAAGS LLQVFVGLVA VLLLIAATAW VAKRFGVARP 
GASSLLQIVS SASVGARERV VVVEVGETWL VVGVAPGSVN ALATLPKGTV PPQAGSGIGL
GSPFAARLQQ LIEKSPYGDK RREK