| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1568 |
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| Symbol | |
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| ID | 3672048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1650662 |
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| End bp | 1652689 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637710254 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_315326 |
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| Protein GI | 74317586 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGTCA CCTTTCCCGA TAGCCCGTTC CGTCTTTTTC AGCCCTTTCC CCCGGCCGGC
GACCAGCCGA CGGCGATCGC CCGGTTGATC GAGGGGATCG ACGACGGCCT GTCGTACCAG
ACCCTGCTCG GGGTGACCGG TTCCGGCAAG ACCTACACCA TGGCGAACGT GATCGCGCGC
GCGGGGCGGC CGGCCCTGAT CATGGCGCCC AACAAGACGC TCGCCGCGCA GCTTTACGCC
GAGATGCGCG AGTTCTTTCC GGAGAACGCG GTCGAGTACT TCGTCTCCTA CTACGACTAC
TACCAGCCCG AGGCCTACGT CCCGGCGCGC GATCTCTTCA TCGAAAAGGA CTCGAGCATC
AACGAGCACA TCGAGCAGAT GCGGCTCTCG GCGACCAAAT CGCTGCTCGA GCGGCGCGAC
ACGGTCATCG TCTGCACCGT GTCGGCGATC TACGGTATCG GCGACCCGTC CGACTACCAC
AGCATGATCC TGCTCCTGCG GCAGAACGAC AAAATGACGC AGCGCGAGGT CATCGCGCGC
CTGACGCAGA TGCAGTACGA CCGCAACGAC GTCGACTTCA AGCGCGGCGT CTTTCGCGTG
CGCGGCGACG TGATCGACAT CTTCCCGGCC GAACACGCCG AGACCGCGAT CCGCGTCGAG
CTCTTCGACG ACGTGGTCGA GACGCTGCAT CTCTTCGATC CACTGACCGG CCAGATCCTG
CAGAAGGTCT CGCGCTTCAC GGTCTTCCCG TCGAGCCACT ACGTCACGCC GCGTGAGACG
ACGCTGCGCG CGATCGAGGC GATCAAGGTC GAGCTGCGCG AGCGCCTTGA CTGGTATTAC
GCCAACAACA AGCTCGTCGA GGCGCAAAGG CTCGAGCAGC GCACGCGTTT CGACCTCGAG
ATGATGGTCG AACTCGGCTT CTGCAAGGGC ATCGAGAACT ACTCGCGGCA TCTGTCGGGC
CGCAAGGCCG GCGAGCCGCC GCCGACCCTG ATCGACTATC TGGCGAAGGA CGCGCTGATG
TTCATCGACG AGTCGCACGT CACCGTGACC CAGGTCGGCG GCATGTACAA AGGCGACCGC
TCGCGCAAGG AAAACCTCGT CGACTACGGT TTCCGGTTGC CCTCAGCGCT CGACAACCGG
CCGCTGAAAT TCGAGGAATT CGAGGCGCTG ATGCCGCAGA CCGTGTTCGT CTCGGCGACG
CCGGCGAAGT ACGAAGCCGA ACACGCGGGG CAGGTCGTCG AACAGCTCGT GCGCCCGACC
GGGTTGATCG ACCCCATCGT CGAGGTGCGG CCGGTCACGA CCCAGGTCGA CGACCTCATG
AGCGAGGTCA AGAAACGCGT GGCCGTGGGC GAGCGCGTCC TCGTCACGAC GCTGACCAAG
CGCATGGCCG AGGACCTGAC CGACTACCTC GCCGAGCACG GCGTCAAGGT GCGCTACCTG
CACTCCGACA TCGACACGGT TGAGCGCGTC GAGATCATCC GCGACCTGCG GCTCGGCGAG
TTCGACGTGC TGGTCGGCAT CAACCTGCTG CGCGAGGGCC TCGACATCCC CGAGGTGTCG
CTGGTCGCGA TTCTGGATGC CGACAAGGAG GGCTTCCTGC GCTCCGAGCG CTCGCTGATC
CAGACCATCG GCCGCGCCGC GCGCCATCTG AACGGCACGG CGATCCTCTA CGCCGACCGG
ATCACCGATT CGATGCAGCG CGCGATCGGC GAGACCGAGC GCCGGCGCGC CAAGCAGATC
GCGTTCAATA CCGAACACGG CATCACCCCG CGCGGCGTCG TCAAGCGCAT CAAGGACATC
ATCGACGGCG TCTACGATGC CGACGCCAGC CGCCAGGAAC TCAAGGCCGC GCAGACCGCC
GCGGAATACA AGGTCATGGA CGAGAAATCC CTGACCAAGC GAGTCAAGAA GATAGAGAAG
GAAATGCAGG ACGCGGCGAA GAACCTCGAG TTCGAAAAGG CCGCGGTGCT GCGGGATCAG
TTGAAGGAGC TGAAGGCGTT GCTGTTCGGG GTGGAGGAGC GGGAGTAG
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| Protein sequence | MFVTFPDSPF RLFQPFPPAG DQPTAIARLI EGIDDGLSYQ TLLGVTGSGK TYTMANVIAR
AGRPALIMAP NKTLAAQLYA EMREFFPENA VEYFVSYYDY YQPEAYVPAR DLFIEKDSSI
NEHIEQMRLS ATKSLLERRD TVIVCTVSAI YGIGDPSDYH SMILLLRQND KMTQREVIAR
LTQMQYDRND VDFKRGVFRV RGDVIDIFPA EHAETAIRVE LFDDVVETLH LFDPLTGQIL
QKVSRFTVFP SSHYVTPRET TLRAIEAIKV ELRERLDWYY ANNKLVEAQR LEQRTRFDLE
MMVELGFCKG IENYSRHLSG RKAGEPPPTL IDYLAKDALM FIDESHVTVT QVGGMYKGDR
SRKENLVDYG FRLPSALDNR PLKFEEFEAL MPQTVFVSAT PAKYEAEHAG QVVEQLVRPT
GLIDPIVEVR PVTTQVDDLM SEVKKRVAVG ERVLVTTLTK RMAEDLTDYL AEHGVKVRYL
HSDIDTVERV EIIRDLRLGE FDVLVGINLL REGLDIPEVS LVAILDADKE GFLRSERSLI
QTIGRAARHL NGTAILYADR ITDSMQRAIG ETERRRAKQI AFNTEHGITP RGVVKRIKDI
IDGVYDADAS RQELKAAQTA AEYKVMDEKS LTKRVKKIEK EMQDAAKNLE FEKAAVLRDQ
LKELKALLFG VEERE
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