| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1522 |
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| Symbol | |
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| ID | 3672001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1610025 |
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| End bp | 1610822 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637710207 |
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| Product | glutamate racemase |
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| Protein accession | YP_315280 |
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| Protein GI | 74317540 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0796] Glutamate racemase |
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| TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.167317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.205372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCACGA ATGCACACTC CCCCATCGGC GTATTCGACT CCGGCATCGG CGGGCTGACG
GTCGTGCGCG CGCTCATGGA GCGGCTTCCC TACGAGAACA TCGTCTATTT CGGCGACACC
GCGCGCGTGC CCTACGGCGT GAAATCGGTC GAGACGATCG CCCACTTCAC GACGCAGATC
GCGCAGTTCC TGCTGGAAAA GGACGTCAAG CTGCTCGTCA TCGCGTGTAA CACGATGGCT
GCCGTCGCCG CGCAGGTCGT CAAGGACCTG TCGCCGGTGC CCGTCCTCGA CGTGATCGAC
GCCGGCGCGG CCTCGGCACG CGGTGGAAAA AAGATCGGCG TCATCGGCAC GCCGACGACG
ATCAACAGCA ACGCTTACGC GCGCGCCATC CACGACTACG CGCCCGACTC GCGCATCCAT
TCACAGGCCT GCCCGCTGTT CGTTCCGCTG GTCGAGGAAG GCTGGCTCGA CAACGAGGTG
ACGCGCCTGA CCGCGCAGGA TTACATGAAG CCGCTCCTGG CCGAGCACAT CGACACGCTC
GTGCTCGGCT GCACCCATTA CCCGCTGCTC AAACCCTTGC TGCGCGAAGT GGTGGGCGAC
GGTGTCGCGC TCGTCGATTC CGCGGAAGCG ATGGCCGAGC AGGTCGCGGC TGTTCTCGCC
GAGAAAAGTC TCGCCAATCC CGGGCCGGCG CAACCGCGCT ACGACTTCTA CGTCACCGAC
GTGCCGCTGC GCTTCCAGAC GATAGGCGAA CGCTTTCTCG GGCGCACGCT CAACAACGTG
CACCTCGTGA AGTGGTGA
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| Protein sequence | MSTNAHSPIG VFDSGIGGLT VVRALMERLP YENIVYFGDT ARVPYGVKSV ETIAHFTTQI
AQFLLEKDVK LLVIACNTMA AVAAQVVKDL SPVPVLDVID AGAASARGGK KIGVIGTPTT
INSNAYARAI HDYAPDSRIH SQACPLFVPL VEEGWLDNEV TRLTAQDYMK PLLAEHIDTL
VLGCTHYPLL KPLLREVVGD GVALVDSAEA MAEQVAAVLA EKSLANPGPA QPRYDFYVTD
VPLRFQTIGE RFLGRTLNNV HLVKW
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