| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1442 |
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| Symbol | |
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| ID | 3673555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1529144 |
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| End bp | 1529713 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637710127 |
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| Product | hypothetical protein |
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| Protein accession | YP_315200 |
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| Protein GI | 74317460 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000142032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGACTG GTGAGCGCGG CCAACGCGGC TTCACCTATC TCTACGTGCT GCTGATGATC
GCGCTCGTCA GCCTCGGCCT GGCTGCGGCG GGCACGGTCT GGCGCACCGA GGCACGGCGG
GCGAACGAAG CCGAATTGCT GTTCGTCGGC GCGCAGTACC GCCAGGCCAT CGAGAGCTAC
TACACGCTCG ACCCGGGCCT GCCGCGGCTG CCGCAAAGCG TCGCCGACCT GCTCGAGGAC
CGGCGCCGGC CCGAGCCGGT ACGCCATCTG CGGCGGGCCT ACCGCGATCC GATCACCGGC
AGGGAAATGC AGTCCATCGT GGCGGAGGGC GAAGGCATCG TCGGCATGAT GAGCGCAGCG
CCCGGCCGTC CACTCAAGCA GGCGGGCTTC CCGCCCGAAG AGCAGGACTT CAGCGATGCC
GAAAGCTACG CCGAGTGGCG CTTCGTCTTC GTCCCGCCGA CCGCGCCGCG TGCCGACGGC
GCATTCCCCG ACGCGGCGGG CGCGCCCGGC CCGGCGCTGG ACGGCTCAGG GCGCATGGAC
GCCCCCATCG AGCCCGGATA CCCGCGATGA
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| Protein sequence | MPTGERGQRG FTYLYVLLMI ALVSLGLAAA GTVWRTEARR ANEAELLFVG AQYRQAIESY
YTLDPGLPRL PQSVADLLED RRRPEPVRHL RRAYRDPITG REMQSIVAEG EGIVGMMSAA
PGRPLKQAGF PPEEQDFSDA ESYAEWRFVF VPPTAPRADG AFPDAAGAPG PALDGSGRMD
APIEPGYPR
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