| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1381 |
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| Symbol | |
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| ID | 3672482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1460875 |
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| End bp | 1461105 |
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| Gene Length | 231 bp |
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| Protein Length | 76 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637710066 |
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| Product | hydrogenase expression/formation protein (HUPF/HYPC) |
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| Protein accession | YP_315139 |
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| Protein GI | 74317399 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0298] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00074] hydrogenase assembly chaperone HypC/HupF |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00885593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGCCTTG CCATTCCGAT GCAGATCGAG TCGATCGACG GTTTTACGGC GCGCTGCGCA
GCGAAAGGCG TGTGGCGCGA CGTCAGCCTG TTCATGATGC AGGATGCGCC GCCCGAGGTG
GGCGACTTCG TCATGGTGCA TGTGGGCTAC GCGATCCAGA AGGTCACCGA AGCCGATGCG
CGCAGCGCGT GGGAATTGCT CGACCAGATC CTGGAGGAAA ACGGTGCATG A
|
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| Protein sequence | MCLAIPMQIE SIDGFTARCA AKGVWRDVSL FMMQDAPPEV GDFVMVHVGY AIQKVTEADA
RSAWELLDQI LEENGA
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