Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1361 |
Symbol | |
ID | 3672462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 1440704 |
End bp | 1441855 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637710046 |
Product | RND efflux membrane protein |
Protein accession | YP_315119 |
Protein GI | 74317379 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGGC TCCCTGTGCA ACGGCGCACG CTCATGCTCG TCGCCGTGAT CCTTCCGCTG CTCGCGCTCT TCGTCTACGT CGGGCTGCGC TCGGGGCCGC TAGCACCGGT GCCCGTCGCG ACCACCACAG TCGAATCGCG GCCGGTCACG CCGGCGCTCT TCGGCATCGG CACGGTCGAG GCGCGCTACA CGTACAAGAT CGGTCCGACC GTCGCCGGGC GCGTCAAGCG GCTGGACGTG CACGCGGGAG ATACGGTCCG CGCAGGGCAG GTACTCGGCG AGATGGACCC GGTCGATCTC GACGATCGCG TCCGCGCCCA GGAAGCGGCT GCCAAGCGCG CACAGGCCAA TCTGCGCGAG GCCGAAGCGC GGAAGTCCTA TGCCGAGGCC CAGGCGAGCC GCTATCAGCA ACTCTTCACC GTGCGTTCGA CCAGCGAGGA AATCCTCACC GCCAAGCAGC AGGAGCTGCA GATCGCGGAA GCCGCGCTGG CGGCGGCGCG GGAAGACATC GCGCGGGCCC GGTCGGACCG CGAAGCGCTA CTGACACAGC GGCGGAACCT GCGCCTGGTG ACGCCGGTCG GCGGCGTCGT CGCCGTGCGC GACGCCGACC CCGGCACGAC CGTCGTCGCC GGGCAGGCCG TGATCGAGGT GATCGACCCC GAGAGCCTGT GGGTCAACGT GCGCTTCGAC CAGATGCGCG CCGCGGGGCT GGCGCGCGGG CTGCCAGCGC GGATCGTTCT GCGCTCGCGC GACGGCCACA CCCTGAAAGG GCGCGTGCTG CGCATCGAAC CGATGGCCGA CGCCGTGACC GAGGAGACGC TCGCTAAGGT GACGTTCGAC ACGCGGCCTG CGCCGCTGCC GCCGGTCGGC GAACTGGCCG AAGTCACGGT GGAACTGCCG GCTCTTGCGG CGGCGCCGAG CGTGCCCAAC GCCGCGATCC GCCGCGAGGG CGGGCAGGTC GGCGTGTGGC GGGTCGTGGA CGGCGACCTT CGGTTCACGC CGGTCAAGCT CGGCGCCTCC GATCTCGACG GCCATGTGCA GGTGCGTGAA GGACTCGAAC CGGGCGACCG CGTCGTGACC TATAGCGAAA AGGCCTTGAC CGAGCGCAGC CGCGTCAAGG TCGTCGAGCG CATCGCGGGA ACGTCGAAAT GA
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Protein sequence | MKRLPVQRRT LMLVAVILPL LALFVYVGLR SGPLAPVPVA TTTVESRPVT PALFGIGTVE ARYTYKIGPT VAGRVKRLDV HAGDTVRAGQ VLGEMDPVDL DDRVRAQEAA AKRAQANLRE AEARKSYAEA QASRYQQLFT VRSTSEEILT AKQQELQIAE AALAAAREDI ARARSDREAL LTQRRNLRLV TPVGGVVAVR DADPGTTVVA GQAVIEVIDP ESLWVNVRFD QMRAAGLARG LPARIVLRSR DGHTLKGRVL RIEPMADAVT EETLAKVTFD TRPAPLPPVG ELAEVTVELP ALAAAPSVPN AAIRREGGQV GVWRVVDGDL RFTPVKLGAS DLDGHVQVRE GLEPGDRVVT YSEKALTERS RVKVVERIAG TSK
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