Gene Tbd_1309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1309 
Symbol 
ID3671881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1388049 
End bp1389353 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content62% 
IMG OID637709994 
Productsulfite reductase, dissimilatory-type alpha subunit 
Protein accessionYP_315067 
Protein GI74317327 
COG category[C] Energy production and conversion 
COG ID[COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits 
TIGRFAM ID[TIGR02064] sulfite reductase, dissimilatory-type alpha subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.28628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAGT CCCCCATCGA AACGCCGAAC CTCGACGAAC TCGAGAAAGG GCCTTGGCCC 
AGCTTCGTGA CCGGCCTCAA GCGCCTCGCC AAAGACAACG ACATGATGGT CGATCTGCTC
GGGCAGCTCG AGACCTCGTA CCAGACCAAG AAAGGCTATT GGAAGGGCGG CACGGTCGGC
GTGTTCGGGT ATGGCGGCGG CGTGATTCCG CGTTTCACCG AACTCAAGGA CGAAAACAAC
CGGCCGCTCT TCCCGGAGGC GGCCGAATTC CACACCCTGC GCATCCAGCC GCCGGCCGGC
ATGCACTACA CCTCGGATCT GCTGCGCAAG ATGTGCGACG TCTGGCAGGA GACCGGCGGC
TCGGGGCTGA TCGCCTTCCA CGGGCAGTCC GGAGACATCA TGCTCCAGGG CATCCGCACC
GAGAACGTGC AGAAGGCCTT CGACGAATTC AACCAGATGG GCTTCGATCT CGGCGGCGCA
GGCCCTTCGC TGCGGACCTC GATGTCCTGC GTCGGCGCCG CACGCTGCGA GCATTCCTGT
TATGACGAGG CCCATGCGCT GCGCACTGTC ATCAACAACA ACATCGACGA CATGCACCGG
CCGTCGCTGC CGTACAAGTT CAAGTTCAAG TTTTCGGGCT GCCCGAACGA CTGCGTGAAC
GCGATCATGC GCTCCGACCT CGCCACGATC GGCACCTGGC GCGACAACAT CCGCGTCGAC
GAGACGCTCG TGCAGGCCTA CATGGCGGCG CACGGCGAGG AGGATCTCGT CAACGACGTG
GTGACCAAAT GTCCGACTCG GTCGATCAGC CTGGTCGCCA CCTCAAAGTT CCAGCCGAGC
GAACACGTCT CCGCCGCCGA CCTCGGCAAC GGCAAGACGA TGTGCATCGA CAACAAGAAC
TGCGTGCGCT GCATGCATTG CATCAACGTC ATCCCTGGCG GGCTACGCGT CGGCACCGAC
AAGGGCGTCA CGATCCTCGT CGGCGGCAAG GGCGTGCTGA AGATCGGCGC GACCATGGGG
ACGGTCGTCA TCCCGTTCAT GAAGCTCGAA ACCGAAGAGG ACTTCGAGAA GCTCAACGAA
CTCGGTCGCA ACGTGATCGA TTTCTTTGCC GAGAACGCAC TCGAGCACGA ACGCACTGGG
GAGATGATCG AGCGCATCGG CTTGAACAAT TTCCTCGAAG GCCTTGATCT GCCGGTCGAT
CCCAACATGA TCAGTCAGCC GCGCATGAAT CCATTCTTCC GTTCCGACGA CTGGGATGAG
CAGGTCGAGA AATGGCTCGA GTACAAGGCG CAGAAGTCCG CCTGA
 
Protein sequence
MPKSPIETPN LDELEKGPWP SFVTGLKRLA KDNDMMVDLL GQLETSYQTK KGYWKGGTVG 
VFGYGGGVIP RFTELKDENN RPLFPEAAEF HTLRIQPPAG MHYTSDLLRK MCDVWQETGG
SGLIAFHGQS GDIMLQGIRT ENVQKAFDEF NQMGFDLGGA GPSLRTSMSC VGAARCEHSC
YDEAHALRTV INNNIDDMHR PSLPYKFKFK FSGCPNDCVN AIMRSDLATI GTWRDNIRVD
ETLVQAYMAA HGEEDLVNDV VTKCPTRSIS LVATSKFQPS EHVSAADLGN GKTMCIDNKN
CVRCMHCINV IPGGLRVGTD KGVTILVGGK GVLKIGATMG TVVIPFMKLE TEEDFEKLNE
LGRNVIDFFA ENALEHERTG EMIERIGLNN FLEGLDLPVD PNMISQPRMN PFFRSDDWDE
QVEKWLEYKA QKSA