Gene Tbd_1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1247 
SymbolflhF 
ID3673337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1309749 
End bp1310993 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content69% 
IMG OID637709932 
Productflagellar biosynthesis regulator FlhF 
Protein accessionYP_315005 
Protein GI74317265 
COG category[N] Cell motility 
COG ID[COG1419] Flagellar GTP-binding protein 
TIGRFAM ID[TIGR03499] flagellar biosynthetic protein FlhF 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCA AACGTATCGT CGCCAAAACG TCCCGCGAGG CCATGCGCCA GCTGCGCGAC 
GCACTCGGCC CCGACGCCGT GATCCTCTCC AATCGCGCGG TCGACGGCGG CGTCGAAGTG
CTCGCGCTGG CCGCCGACGA CATCGCCGCG ATGGCGCCGC CTGTGGTCGA GCCTGCGCCC
GCTGAGGTGC GTGCGCCGGC GCAGCGCGAC GAAGCGGAGG CGCCGGCGGT GACCTTCAAG
CGCCGACTGG TCGAGCGGGT CGCGGTGCCG AGCCCGGACA GTGCCGAACT CGCGCAAAGC
GTGCTCTGCG AAATCAAGTC GATGCAGACG CGGCTGGAGA GCCAGCTTGC CGACCTGACC
TGGCGCGATC TGCCCGGACG TGATCCCGCA GGCGCCGCCG TCATGCGCGA GATGCTCGGC
GCCGGATTCA GCGCGACCCT TGCGCGCGAG ATGCTCGAAA GCCTGCCCAA GGGCGAGGGC
GAGCAGGCCC AGACTTGGAT GCGCAACACG CTGATGAAGC GCCTGCAGGT GATGCAGACC
GAAAACGACA TGCTCGACGG CGGCGGCGTG TTCGCCCTGA TGGGCCCGAC CGGCGCCGGC
AAGACGACGA CCACGGCCAA GCTCGCCGCA CGTTTCGTGG TCCGCCACGG CGCCGACAAG
CTCGCGCTCC TGACGACCGA CAGCTACCGG ATCGGCGGTC ACGAACAGCT GCGCATCTAC
GGCAAGATCC TCGGCGTCGC CGTGCACGCG GTGCGCGACG CGGCCGACCT GCGGCTCGCG
CTGTCGGAAC TGCGCAACAA GCACACCGTT CTGATCGACA CGGTCGGCAT GAGCCAGCGC
GACCGCGCGG TGGCCGAGCA GGTCGAAATG CTCGGCCAGG CCGGCAAGCC GATCAAGCGC
CTGCTGCTGC TCAACGCGAC GAGCCACGGC GACACCCTCA ACGAGGTCGT CGAGGCCTAC
CGCACGCGCG GCCTCGACGG CTGCATCCTG TCGAAGATCG ACGAGGCGGC GAGCCTCGGC
CCGGCCCTCG ACTGCGCGAT CCGCCATCAG CTGAACGTGC ATTACCTGGC GACCGGCCAG
CGCGTGCCCG AGGATCTGCA CCTCGCCAAT CGTCAGTACC TGATCCATCG TGCCTTCAAG
ACCCGCGTGC CGGCGTCGCC CTGGCAACTC GAGGAGAACG AGCTCGCGTT CGCGCTCGCC
GGTCAATCGG CGGCCTACCG TGAAAGCGCG GTGACCCTTG GATAA
 
Protein sequence
MNVKRIVAKT SREAMRQLRD ALGPDAVILS NRAVDGGVEV LALAADDIAA MAPPVVEPAP 
AEVRAPAQRD EAEAPAVTFK RRLVERVAVP SPDSAELAQS VLCEIKSMQT RLESQLADLT
WRDLPGRDPA GAAVMREMLG AGFSATLARE MLESLPKGEG EQAQTWMRNT LMKRLQVMQT
ENDMLDGGGV FALMGPTGAG KTTTTAKLAA RFVVRHGADK LALLTTDSYR IGGHEQLRIY
GKILGVAVHA VRDAADLRLA LSELRNKHTV LIDTVGMSQR DRAVAEQVEM LGQAGKPIKR
LLLLNATSHG DTLNEVVEAY RTRGLDGCIL SKIDEAASLG PALDCAIRHQ LNVHYLATGQ
RVPEDLHLAN RQYLIHRAFK TRVPASPWQL EENELAFALA GQSAAYRESA VTLG