| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1193 |
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| Symbol | |
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| ID | 3671554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1254910 |
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| End bp | 1257483 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637709877 |
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| Product | multi-sensor Signal transduction histidine kinase |
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| Protein accession | YP_314951 |
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| Protein GI | 74317211 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.146062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAAGCCG TAGACGCCGC CTCACAACGA CCGGAATCTG CGTGGCAGCC CGCGTTCGTG
CGGCGCTTTC TGGCCATCTG GTTGCCAGGC CTGTTGGTGT TGGGTGCCGT CATCTGGGCG
TTTTACGCCG TGCAGGCGAA GAGCGCGCTT GCACTCTTGA AAGCCGCGGA GCGCGAGGCG
ATCCAGTTGT CGGTCCAGGC GAGCCAGAGC GAATCCGCAG ACGTCCGTTC CGATCTGCTC
TACCTGTCGG ACCAGTACAC CCTCCTCGAC GACATGACCC GCGCAGAGTC CGACGTGCAC
GCCGGGCTCG CCGCGCGCTA TTCCGCCTTT GCGACGCGCA AGAAGGTCTA CGACCGGTTG
CGTCTGCTCG ACCTGCGCGG CCGCGAGGCC GTTCGCGTCG ACTGGAACGA TGGGAGTCCG
CTGGGCGTGG CACGCGAGCG ATTGCGGGAT GCGTCCGGCA GCGCCGACTT CCATGCGATG
CTCGCGCTGG AGCGGGACGA AATCTACGTC TCGCGCCTCG ACCTCGACGG CGGGCAGGCC
ACTCCGGCGC GACCGCTCAA ACCCACCTTG CGTCTCGCGA CCCCGGTCTA CGACCGGCAA
GGCAACAGAC GCGGCATCAT TGTGCTCGAC TATCTGGTGG AGCTGTTCCT CGACCGTCTG
CGCAACATCC GCGAGTCCGA CCGTCAGCCC CGCTCGATCC GGCTCCTGAG CGCCGACGGT
TACACACTGC CCGATCAGGA AAAGCCCGAT GGCCCCGACC CGATGGGTCA GCGTGAAACC
GAAAGCCGAC TCGGCGAACG CGATCCTCAG GCGTGGCAGC GGATCGGCAG CGGCGCCGCC
GAAGGTCAGT TCGTGACCGG TCAGGGCTTG TACACCTACG CCTGGATCGA CCCCCTGTCG
CCGCCGGGCG CGGCCCCTGC CGACGCGGAC ACCCGACGCG CGCTGTTGCT GGCGTACAAG
CCGGCGGCGG CGGTCGACGC CATCGGCGGC ACGCTCAAGC AGCGGCTCTG GCTGGTGTTC
GGCGTGCTCG CGCTATTGTT CACCTTCGCC GCCTGGGCGA TCACGTTCTA CAGCATGCGG
CGCCGTATGG CCGAGGAGAA CGTGCGGGCC AGCGAGGCAC GTTTTCGCGC GCTGCTCGAA
TCCGCGCCGG ATGCGATCGT GATCGCCGAC CCGAAGGGCC GCATAGAGCT GGCGAATGCG
CAGGCGGAGA AATATTTCGG CTACACGCGC GATGAGTTGC TGCACCAGTC GATCGAGATC
CTGGTTCCCG AGTCGCTGCG CGACCGCCAT GTCTCCCACC GCGCGAACTA CGCCGCCGAT
CCCTATCCGC GTCCGATGGG CGCCGGCCTC GAGCTGTTCG GGCGGCGCAA GGATGGCAGC
GAATTTCCGA TCGAGATCAG CCTGAGCCCG CTGCAAACCC CTCAGGGAAT GGTCGTGACC
GCGATCATTC GCGACATCAG CGCACGCAAG CAGATCGAAC GTCAGCGCAA GGACGCGCAG
ACACGCTATC GTGAACTTAT GGACAACCTG CCTGTAGGGG TATACCGCAA GACGGCCGGT
GCGGACGGGC GCTTCCTGGA GGTGAACCCG GCGCTGGTGA GCATGCTCGA GGCCGACTCG
GCCGCGGCGC TGCTCGAACG CCCGCTCGCG ACCTTCAGGA CGGCCGAGGG CCGGCCTCTC
TTCGGCGGAG ACGAACGCCA GCTCGACGCG GTCGTCAACG CCGAAATCGA GCTGCTGACC
CTCAAGGGCC GCCCGTTCCA CGGTGCCATC AGCGCCCGCC TGCGGCGCGA GGCGGACGGC
AGGACGTATT ACGACGGCAT CATCGAGGAT GTCACCGCGC GCAAGGAAAT AGAGCGCCAG
CTCGAGAGTC GCACCGCCGA ACTGGAGGCG ATCAATCGCG AACTCGAGGC GTTCAGCTAT
TCCGTCTCGC ACGACCTGCG CGCGCCGCTG CGCGCGATCG ACGGCTTCAG CCGCATTTTG
CTCACCGACT ACACCGAGCG CCTCGACGAG ACCGGGCGCG ACCGCCTCGG ACGGATACGC
CGCGCGGCCC AGCACATGGG CACGCTGATC GACGACCTGC TCAAGCTGTC GCGCGTCACC
CGCACCGAGT TGAAGCCGGA AGACGTCGAC ATGAGCGCGC TGGCCGAAGA CGTCGCCAAC
GATCTGCGCC GGCAGACGCC CGAGCACGAG GTGGCTTTCA GCATCGCGCC TGCCTTGCAT
GCGAACGGCG ACCGCGGCCT GCTGCGCATC GTCCTCGACA ACCTGCTCGG CAATGCCTGG
AAATTCACCG GCGGCCGCCC CGACGCGCGC GTGTCGCTCG ATGTGGACCT CCGTGGCGGA
CAAACCGTCT ACGTCGTTAG CGACAACGGC GCAGGTTTTG ACATGGCCTA CGCCGACAAG
CTGTTCGGCG TCTTCCAGCG GCTGCACGAC GTCAAGGAAT TTCCGGGAAC CGGCATCGGA
CTTGCGACCG TTCAGCGCAT CGTCCACAAG CACGGCGGCC GCATCTGGGC CGAGAGCGAA
GTCGGCAGGG GCGCGCGGTT TTACTTCACA CTGGAGGCGG AGGGAGGAGC GTGA
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| Protein sequence | MQAVDAASQR PESAWQPAFV RRFLAIWLPG LLVLGAVIWA FYAVQAKSAL ALLKAAEREA
IQLSVQASQS ESADVRSDLL YLSDQYTLLD DMTRAESDVH AGLAARYSAF ATRKKVYDRL
RLLDLRGREA VRVDWNDGSP LGVARERLRD ASGSADFHAM LALERDEIYV SRLDLDGGQA
TPARPLKPTL RLATPVYDRQ GNRRGIIVLD YLVELFLDRL RNIRESDRQP RSIRLLSADG
YTLPDQEKPD GPDPMGQRET ESRLGERDPQ AWQRIGSGAA EGQFVTGQGL YTYAWIDPLS
PPGAAPADAD TRRALLLAYK PAAAVDAIGG TLKQRLWLVF GVLALLFTFA AWAITFYSMR
RRMAEENVRA SEARFRALLE SAPDAIVIAD PKGRIELANA QAEKYFGYTR DELLHQSIEI
LVPESLRDRH VSHRANYAAD PYPRPMGAGL ELFGRRKDGS EFPIEISLSP LQTPQGMVVT
AIIRDISARK QIERQRKDAQ TRYRELMDNL PVGVYRKTAG ADGRFLEVNP ALVSMLEADS
AAALLERPLA TFRTAEGRPL FGGDERQLDA VVNAEIELLT LKGRPFHGAI SARLRREADG
RTYYDGIIED VTARKEIERQ LESRTAELEA INRELEAFSY SVSHDLRAPL RAIDGFSRIL
LTDYTERLDE TGRDRLGRIR RAAQHMGTLI DDLLKLSRVT RTELKPEDVD MSALAEDVAN
DLRRQTPEHE VAFSIAPALH ANGDRGLLRI VLDNLLGNAW KFTGGRPDAR VSLDVDLRGG
QTVYVVSDNG AGFDMAYADK LFGVFQRLHD VKEFPGTGIG LATVQRIVHK HGGRIWAESE
VGRGARFYFT LEAEGGA
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