Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1184 |
Symbol | |
ID | 3671545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 1243085 |
End bp | 1244839 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637709868 |
Product | succinate dehydrogenase subunit A |
Protein accession | YP_314942 |
Protein GI | 74317202 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCGGC GCCGCTTCGA CGCGCTGATC GTCGGCGGCG GCGGTGCCGG CCTGCGCGCC GCGCTGCAGC TTGCGCGCTC GGACCACAAG GTCGCCGTGG TGTCGAAGGT ATTCCCGACA CGCTCGCACA CCGTTTCTGC ACAGGGCGGC ATCACGGCGG CGCTGGCGAA CGTCGACGAC GACCGCTGGG AATGGCACAT GTACGACACG GTCAAGGGCG GCGACTGGCT GGGCGACCAG GATGCGATCG AGTTCATGTG CCGCGAGGCG GCGTCGGCCG TCTACGAACT CGAACACATG GGGCTGCCGT TCTCGCGGCT CGACGATGGC AGGATCTACC AGCGGCCCTT CGGCGGGCAG TCGAAAAACT TCGGCGGCGA GCAGGCGACG CGCACCTGCG CCGCGGCCGA CCGCACCGGC CATGCGCTGC TGCACACGCT CTACCAGCAG AACATCGCGC ACCGCACGCA ATTCTTCGAC GAATACTTCG CGCTCGACCT CGTGCGCGAC GACGCGGGCT ACTGCCTCGG CGTGACCGCG CTTTCCATCG AAACCGGCGA GCCGGTGTTG ATCGAGGCGC GCACGACGCT GCTCGCGACG GGCGGGGCAG GGCGCATTTT CGGCAACACC AGCAACGCGA TGATCAACAC CGGCGACGGC CTCGGCATGG TCCTGCGCGC CGGCCTGCCG CTGCAGGACA TGGAGTTCTG GCAGTTCCAC CCGACCGGGA TCGCCGGCGT CGGCAGCCTT ATTACCGAAG GCGCGCGTGG CGAGGGCGGC TACCTGCTGA ACCGTCACGG CGAGCGCTTC ATGGAGCGCT ACGCACCGCA CGCCCGGGAC CTCGCCGGCC GCGACGTGGT CGCCCGCGCG ATCGCGATCG AGATCGCGGA AGGGCGCGGC TGCGGGCCCC GGGCGGACTA CGTCGAGCTC AAGATCGACC AGCTCGGCGA ACAGACCATT TCGGAGAAAC TGCCGGGCAT CCGCGAACTC GCGATCCGCT TCGCCGGCGT CGACCCGGTC GAGAAGCCGA TTCCAGTCGC ACCGACGGCG CACTACATGA TGGGCGGCAT TCCGACCGAC CTGCATGGCC AGGTCGTCGC CCCCGCGCGC TTCGGCCCCG AGGAGCCGGT GCCCGGCCTC TATGCCGTCG GCGAGTGTGC CTGCGTGTCG GTGCACGGCG CGAACCGCCT CGGCGGCAAC TCGCTGCTCG ACCTCATCGT CTTCGGCCGC GCCGCGGGCC GGCACATGCT CGACTACCTG CGCGACAACC CCTACCCGCG CGCGCTGCCC GAGAATGCCG CCGAAGCGAG CCTGCAGCGC CTCGCGCGCT GGGAGCGCCC GGGCGGCGAA CGCGTCGCCG CGATCACCGA CGACCTGCGG CGCATGATGG GCGCGCACGC CGGCGTTTTC CGCACCGAGA CGAGCCTGCG CGAAGGCCTG CGCAAACTCG ACCTGCTCGA AGCGCGGCTC GCGCACGCCG GCCTGCAGGA CACCAGCCGC ATCTTCAACA CGGCGCGCAT CGAAGCGCTC GAGCTGGAAA ACCTGATCGG GGTCGCGCGC GCGACCCTGG TCTCGGCGAT CCACCGCACC GAGAGCCGCG GCGCCCATAC GCGCGAGGAC TTCCCGCGAC GCGACGACGA GAACTGGCTC AGGCACACCC TCTATTCGCG CGAGGGGGAT CAGGTGGATA GCAAGCCGGT GCGCTTGAAG CCGTTGACCG TGGAGTCGAT ACGGCCGAAG GAGAGGGTGT ATTGA
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Protein sequence | MNRRRFDALI VGGGGAGLRA ALQLARSDHK VAVVSKVFPT RSHTVSAQGG ITAALANVDD DRWEWHMYDT VKGGDWLGDQ DAIEFMCREA ASAVYELEHM GLPFSRLDDG RIYQRPFGGQ SKNFGGEQAT RTCAAADRTG HALLHTLYQQ NIAHRTQFFD EYFALDLVRD DAGYCLGVTA LSIETGEPVL IEARTTLLAT GGAGRIFGNT SNAMINTGDG LGMVLRAGLP LQDMEFWQFH PTGIAGVGSL ITEGARGEGG YLLNRHGERF MERYAPHARD LAGRDVVARA IAIEIAEGRG CGPRADYVEL KIDQLGEQTI SEKLPGIREL AIRFAGVDPV EKPIPVAPTA HYMMGGIPTD LHGQVVAPAR FGPEEPVPGL YAVGECACVS VHGANRLGGN SLLDLIVFGR AAGRHMLDYL RDNPYPRALP ENAAEASLQR LARWERPGGE RVAAITDDLR RMMGAHAGVF RTETSLREGL RKLDLLEARL AHAGLQDTSR IFNTARIEAL ELENLIGVAR ATLVSAIHRT ESRGAHTRED FPRRDDENWL RHTLYSREGD QVDSKPVRLK PLTVESIRPK ERVY
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