Gene Tbd_1166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1166 
Symbol 
ID3673238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1219674 
End bp1219997 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content63% 
IMG OID637709850 
ProductIron-sulphur cluster assembly protein IscA 
Protein accessionYP_314924 
Protein GI74317184 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein
[TIGR02011] iron-sulfur cluster assembly protein IscA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0148248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCA CATTGTCCGA GCGCGCAGCG CAACACGTTA CCAACTTCCT CGCCAAACGC 
GGCAAGGGCG TGGGCATCCG TCTCGGCGTG CGCACCAGTG GCTGCTCCGG CATGGCCTAC
AAACTGGAAT TCGCCGACGA GACGCCCGAG GGCGACGAGG TCTTCACCAG CCACGGCGTC
ACCGTCTTCG TCGATCCGAA GAGTCTGCCC TACATCGACG GGACCGAGCT CGACTACACG
CGCGAAGGCC TGAACGAGGG GTTCAAGTTC AACAACCCCA ACGTCAAGGA CGCGTGCGGC
TGCGGCGAGT CGTTCAACGT TTAA
 
Protein sequence
MAVTLSERAA QHVTNFLAKR GKGVGIRLGV RTSGCSGMAY KLEFADETPE GDEVFTSHGV 
TVFVDPKSLP YIDGTELDYT REGLNEGFKF NNPNVKDACG CGESFNV